Shewanella denitrificans: Sden_0015
Help
Entry
Sden_0015 CDS
T00344
Name
(GenBank) short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00071
Fatty acid degradation
sdn00280
Valine, leucine and isoleucine degradation
sdn00310
Lysine degradation
sdn00362
Benzoate degradation
sdn00380
Tryptophan metabolism
sdn00410
beta-Alanine metabolism
sdn00640
Propanoate metabolism
sdn00650
Butanoate metabolism
sdn00907
Pinene, camphor and geraniol degradation
sdn00930
Caprolactam degradation
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01212
Fatty acid metabolism
Module
sdn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sden_0015
00650 Butanoate metabolism
Sden_0015
09103 Lipid metabolism
00071 Fatty acid degradation
Sden_0015
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sden_0015
00310 Lysine degradation
Sden_0015
00380 Tryptophan metabolism
Sden_0015
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sden_0015
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sden_0015
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sden_0015
00930 Caprolactam degradation
Sden_0015
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sden_0015
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sden_0015
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sden_0015
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Sden_0015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ABE53312
UniProt:
Q12TB4
LinkDB
All DBs
Position
complement(20924..23152)
Genome browser
AA seq
742 aa
AA seq
DB search
MMADTAVKQATVYLCGSRFLAIRKQAMIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRE
TLASLDAALDSIKQNASIQALVLTSAKSTFIVGADITEFLGLFKQDDATLLTWVEQANAV
FNKLEDLPFPTISAINGFALGGGCETILATDFRVADTNARIGLPETKLGLIPGFGGTVRL
PRVIGADNALEWITTGKEQRPDDALQVGAIDAVVEPENLLAAALQMLKDALAEKLDWQAR
RKRKQSPLALPKLEAMMSFTTAKGMVYAVAGKHYPAPMAAVSVVEQAATLDRAGALKVEN
LAFIKLAKTEVATALIGIFLNDQFVKGKAKKAGKLAKDVNSAAVLGAGIMGGGIAYQSAS
KGTPIVMKDIAQPALELGLNEAAKILATQVARGRSTPEKMAKVLNNITPSLDYAAIKHSD
IVVEAVVEHPKVKATVLAEVEDYVAEDAIIASNTSTISINLLAKSLKKPERFCGMHFFNP
VHKMPLVEIIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLL
ADGADFAAVDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKNGTDAIDI
MFENKRLGQKNSKGFYAYSVDRRGKPKKDIDATSYQLLGAAFGELKAFEADDIIARCMIP
MIIETVRCLEEGIIASPAEGDMGLVYGLGFPPFRGGVFRYIDTMGVANFVALADKYAHLG
GLYQVTDAMRELAANNGSYYQA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgacactgctgtaaaacaagctactgtgtatctatgtggaagtcgcttttta
gcaataaggaagcaagcaatgatctaccaaagccccacaattcaggttgagttacttgaa
gataatattgccaagctgtgctttaacgcacctggctcggttaacaaattcgacagagaa
actcttgcctcgctagacgctgcattagacagcatcaaacagaacgctagcatacaagcg
ctggtgttaacctcagcaaaaagcacctttatcgtgggtgcggacatcaccgaattttta
ggtctatttaagcaagatgatgccaccttgctcacttgggttgaacaagcaaatgccgtg
ttcaataaattagaagacctgccgttcccgactatctccgccatcaatggttttgctctg
ggtggcggttgtgaaaccattttagccacagacttccgtgttgctgataccaatgcgcgc
atcggtctgcctgaaaccaaactgggactcattcctggatttggcggcacagtgcgctta
cctcgcgttattggtgctgacaacgcgctagagtggatcaccacaggtaaagaacaacgc
ccagatgatgccctgcaagtgggtgccatcgatgcggttgttgaaccagaaaacttatta
gccgctgcgctacaaatgcttaaagatgccctagctgaaaagctagactggcaagcacgc
cgtaagcgtaagcaatcaccattagcactgccaaaacttgaagccatgatgtccttcacc
acggcaaaaggcatggtgtatgccgttgctggtaaacattatccggcgcctatggctgct
gtcagtgttgtagaacaagcggcaacgttagacagagccggtgcattaaaagttgaaaac
ctcgccttcatcaagctcgctaaaaccgaagtagctacggctttaatcggtattttctta
aacgatcaattcgttaaaggcaaagctaagaaagccggcaagctagcaaaagacgttaat
agtgctgcggtattgggtgcaggtatcatgggcggcggtatcgcttaccagagcgccagc
aaaggcacaccaatagtaatgaaagacattgcccagccagccctagaattaggtttgaat
gaagccgctaagattttagccacccaagtggctcgtggtcgttcaacaccagaaaaaatg
gccaaggtacttaacaacattactccatcattggactacgctgccattaagcatagcgac
attgtggttgaagcagtagttgagcatccaaaagtgaaggctacagtactggcagaagtt
gaagattatgtcgcagaagatgccatcatcgcctctaacacttcgacgatttctatcaat
ttattagccaaaagccttaagaagcctgaacgcttctgcggcatgcacttctttaaccca
gtgcataaaatgccattagttgaaatcatccgtggtgagcacagctcagaagagaccatc
gcctctgttgtggcctatgccagcaaaatgggcaagacgccaatcgtcgttaacgattgt
ccaggcttcttcgttaaccgcgtgttattcccctactttgctggtttcaatggtctgctt
gccgatggcgctgactttgccgctgtcgataaagtcatggaaaaacagttcggttggcca
atgggcccagcatatttacttgatgtggttggccttgatacgggtcatcatgcacaagcg
gtaatggctgaaggcttccctgaccgcatgggtaaaaatggcactgacgcgattgatata
atgtttgaaaacaaacgcttagggcagaaaaactcaaaaggtttctatgcttactctgtt
gaccgtcgtggcaaaccgaagaaagatatcgatgccactagctaccagttattaggtgca
gcttttggtgaattaaaagcatttgaagcggatgacattattgcccgttgtatgatccct
atgatcattgaaacagtacgttgcttagaagaaggcatcatagcttctcctgctgaaggc
gatatgggtctggtttacggtctaggtttcccaccattccgtggtggtgtattccgttat
atagataccatgggcgtagcaaacttcgtcgctctggcagacaaatacgcacatttaggt
ggcttatatcaagtgactgatgcgatgcgtgaacttgcagccaataacggtagctactac
caagcctaa
DBGET
integrated database retrieval system
