Shewanella denitrificans: Sden_0038
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Entry
Sden_0038 CDS
T00344
Name
(GenBank) Integrase, catalytic region
KO
K07482
transposase, IS30 family
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Sden_0038
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GFIT
Motif
Pfam:
HTH_38
HTH_23
rve
HTH_7
HTH_29
HTH_30
HTH_28
HTH_32
HTH_11
LZ_Tnp_IS481
Terminase_5
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ABE53335
UniProt:
Q12LY4
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Position
complement(50191..51132)
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AA seq
313 aa
AA seq
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MSYQQLTEGRRYQISVLLDQGISIALIAKAINCHRATVYRELKRCHALQGYCPDSAQASA
CKMRRHSAKYTIPDTRINFVRFLLQHDWSPEQISRVLSGMNQAVSHEWIYRFVARNKRQG
GKLYRHLRQGHKRYRRGKKEKAPAIKNGTSIDSRPAIVDTRERFGDWEIDTVLGKHGTGS
IVTILERKTRFYLIKKVASKSAEDVTKATIELLMPYKQYVHTITADNGREFAHHEVIANA
LDTTFYFAHPYSSWERGANENANGLLRQYVKKGTDLRTVSDAIILFAQNRINYRPKKCLK
FKQPAVVFKQLAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcagcagttgactgagggaagaagatatcagatttcagtccttttagaccag
ggtatttcgatagctttgattgcaaaagctatcaattgtcatcgtgcgactgtctatcga
gaactaaaacgttgtcatgccctgcagggttattgccctgacagcgctcaagccagtgcg
tgtaagatgcggcgtcattcagccaaatataccatccccgatacaagaataaacttcgtc
cgcttcctactgcaacatgattggagcccagagcagatttcacgggtgttatcgggcatg
aaccaagctgttagtcatgaatggatttaccgctttgtggcaaggaataaacgtcaaggc
ggcaagctatatcgccatctacggcaaggtcataagcgctatcgcagaggtaaaaaagag
aaagcgccagcgattaaaaatggtacctctatcgactctagacctgccattgttgatact
cgcgaacgtttcggtgattgggaaatcgataccgtattaggcaagcatgggacaggttca
atagtgacaattttagagcgaaagacccgtttttatttaataaagaaagtggcctcaaaa
tctgctgaagatgtgactaaagcgactatcgaattattgatgccctataagcaatatgtg
cacactataactgccgataatggtcgtgaattcgctcatcatgaagtcatagccaacgcg
ttagacacaacattttactttgctcatccgtatagttcttgggaacgtggcgccaatgaa
aatgccaacggtttattaaggcagtatgtaaaaaaagggactgacttaaggacagtaagc
gacgccatcatcttatttgcccagaacaggattaattacagacctaagaaatgtttgaag
tttaagcagccagctgttgtgtttaaacaattagccgcttaa
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