Shewanella denitrificans: Sden_0078
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Entry
Sden_0078 CDS
T00344
Name
(GenBank) CMP/dCMP deaminase, zinc-binding
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00240
Pyrimidine metabolism
sdn01100
Metabolic pathways
sdn01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Sden_0078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdn02044
]
Sden_0078
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Sden_0078
Secretion system [BR:
sdn02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Sden_0078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
ABE53375
UniProt:
Q12T51
LinkDB
All DBs
Position
87451..87894
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AA seq
147 aa
AA seq
DB search
MISKWAKRFFQMAELVGSWSKDPSTQVGAVITKHNRIVSVGFNGYPHGISDSAETDDRDM
KLLKTLHAEENAILFAKRDLDGCDIWVTHFPCPNCAAKIIQTGITGVFCPEQNADFLSRW
GDKISISQEMFLQAGVKVTWLPLDELA
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaagtgggcaaaacgattctttcaaatggcagagctggtggggtcttggagt
aaagatccttcgacccaagtgggagctgtgatcactaaacataatcgtatcgtttctgtg
ggctttaatggctaccctcacggtatttctgacagtgcagaaaccgatgatcgtgatatg
aagctacttaaaaccttgcacgcagaagaaaatgcgattctttttgctaagcgagatctc
gacggctgtgatatttgggtcactcactttccttgccccaattgcgccgccaagatcatt
caaacagggatcactggggtgttttgcccagaacaaaatgccgattttctctcccgttgg
ggcgacaaaatcagtataagccaagaaatgttcttacaagctggggttaaggtgacttgg
ttgccactggatgaattggcttaa
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