Shewanella denitrificans: Sden_0097
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Entry
Sden_0097 CDS
T00344
Name
(GenBank) protein of unknown function DUF890
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_0097
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
Sden_0097
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sden_0097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Motif
Other DBs
NCBI-ProteinID:
ABE53394
UniProt:
Q12T32
LinkDB
All DBs
Position
108476..109558
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AA seq
360 aa
AA seq
DB search
MSKLISKQGKRPALSQSGLAKPSTSKKSSASKNANTETAKLLTKALHPRNVHKYGYDFAA
LSKTLPALTPFVGPNAYGNISIDFANPDAVKQLNAALLLHHYSIRDWDIPHGYLCPPIPG
RVDYLHYLADLLSAPHKGKANRNIRALDIGTGANGIYPLLGIESYSWQFVASDIDKVSLD
NVDEILAKNPQLAAKLSLRLQLNPKAIFNGVIEKDEYFDVSLCNPPFHRSLADANAGTQR
KLSNLAKNRGQSQQQAVQAKVALNFGGQKAELWCEGGEAAFLANMISESKGFAAQCLWFT
SLVSKSENLKPCYAQLAKQGTSEVKTIEMHQGNKITRILAWSYLSLSQRQAWAKLRDQSR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacttatcagtaagcagggcaaacggcctgcactgtctcagagcgggcttgcc
aagccctctacatcgaaaaagtcttccgcgtccaaaaacgcaaataccgagacggctaaa
ctgctcactaaggcccttcacccacgtaacgtgcataagtatggctatgattttgctgcc
ttatctaagacattgcctgcgctgaccccttttgtgggccccaatgcttacggcaatatc
tcaattgattttgccaatccagatgcagttaaacagcttaatgccgcactcttgctgcac
cattacagcatacgtgactgggatatacctcatggctatttgtgcccacccattccaggg
cgagtggattatctgcattatttagccgatttattgagtgcccctcataagggcaaggct
aatcgaaacattcgtgcgctggatataggcacaggtgctaatggtatctatccgcttttg
gggatagaaagctattcatggcaatttgtcgccagtgatatcgacaaggtttcattggat
aatgtggatgaaatccttgcaaagaatccgcagctagctgccaagcttagcctcaggctg
cagctcaatcccaaggcgatatttaacggcgtgattgagaaggacgaatacttcgatgtc
agcttgtgtaatccgccttttcatcgttcattagccgatgccaacgccggcactcagcgt
aaacttagtaatcttgctaagaatagaggccagtcacaacagcaagcagttcaagctaag
gttgcacttaactttggtggccaaaaagcagagctttggtgcgaaggcggtgaagccgca
tttctagctaatatgatttctgagagcaaaggctttgcggctcagtgtctatggtttacc
tcattagtctcaaagtcagaaaacttgaaaccttgttatgcgcagttagccaaacaaggg
actagcgaagtgaaaaccatagagatgcatcaaggcaataaaattacccgtattttggca
tggagttatctcagtctttctcagcggcaagcatgggccaagctgcgtgatcaatcgcgt
taa
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