Shewanella denitrificans: Sden_0238
Help
Entry
Sden_0238 CDS
T00344
Name
(GenBank) Integrase, catalytic region
KO
K07482
transposase, IS30 family
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Sden_0238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_38
HTH_23
HTH_7
rve
HTH_30
HTH_28
HTH_29
HTH_32
HTH_11
UPF0122
RecX
Motif
Other DBs
NCBI-ProteinID:
ABE53535
UniProt:
Q12SP1
LinkDB
All DBs
Position
complement(271412..272353)
Genome browser
AA seq
313 aa
AA seq
DB search
MSYQQLTEGRRYQISVLLDQGISITLIAKAINCHRATVYRELKRCHALQGYCPDSAQASA
CKMRRHSAKYKIPDTRINVVRFLLQHDWSPEQISRVLSGMNQAVSHEWIYRFVARNKRQG
GKLYRHLRQGHKRYRRGKKEKAPAIKNGTSIDSRPAIVDTRERFGDWEIDTVLGKHGTGS
IVTILERKTRFYLIKKVASKSAEDVTKATIELLMPYKQYVHTITADNGREFAHHEVIANA
LDTSFYFAHPYSSWERGANENANGLLRQYVKKGTDLRTVSDDIILFAQNRINYRPKKCLK
FKQPAVVFKQLAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcagcagttgactgagggaagaagatatcagatttcagtccttttagaccag
ggtatttcgataactttgattgcaaaagctatcaattgtcatcgtgcgactgtctatcga
gaactaaaacgttgtcatgccctgcagggttattgtcctgacagcgctcaagccagtgcg
tgtaagatgcggcgtcattcagccaaatataagatccccgatacaagaataaacgtcgtc
cgcttcctactgcaacatgattggagcccagagcagatttcacgggtgttatcgggcatg
aaccaagcggttagtcatgaatggatttaccgctttgtggcaaggaataaacgtcaaggc
ggcaagctatatcgccatctacggcaaggtcataagcgctatcgcagaggtaaaaaagag
aaagcaccagcgattaaaaatggcacctctatcgactctagacctgccattgttgatacc
cgtgagcgttttggtgattgggaaatcgataccgtattaggcaagcatgggacaggttca
atcgtgacaattttagagcgaaagacccgtttttatttaataaagaaagtggcctcaaaa
tctgctgaagatgtgactaaagcgactatcgaattattgatgccctataagcaatatgtg
cacactataactgccgataatggtcgtgaattcgctcatcatgaagtcatagccaacgcg
ctagacacctcgttttactttgctcatccgtatagttcttgggaacgtggcgccaatgaa
aatgccaacggtttattaaggcagtatgtaaaaaaagggactgacttaaggacagtaagc
gacgacatcatcttatttgcccagaacaggattaattacagacctaagaaatgtttgaag
tttaagcagccagctgttgtgtttaaacaattagccgcttaa
DBGET
integrated database retrieval system
