Shewanella denitrificans: Sden_0274
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Entry
Sden_0274 CDS
T00344
Name
(GenBank) Protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_0274
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Sden_0274
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sden_0274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF3730
Motif
Other DBs
NCBI-ProteinID:
ABE53570
UniProt:
Q12SK6
LinkDB
All DBs
Position
311154..311996
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AA seq
280 aa
AA seq
DB search
MDQRVALYVVPTPIGNFGDMSSRAIEVLNQVALIACEDTRHSGKLLSHFGIATRKIALHD
HNERDRAQWIVEKLQAGESIALISDAGTPLISDPGYHLVKHVREAGFDVIPLPGPCAAIT
ALSASGLPSDRFSFEGFLPAKEKGRCDKLEALREDPRTLIFYESPHRIEQSLASIVQVLG
EDRQMVMAREVTKTFETFLSGTAQEILDIVRHDPNQQKGEIVLMCHGFVTQDEEAIPTVA
LNTLTLLCEELPLKKAAAIAAQIHGLKKNALYKYGLSIDL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagggtcgcactgtacgttgttcccaccccaattggtaattttggagacatg
agttcccgtgccattgaggtgctaaatcaagtcgccttgattgcttgtgaggacacgcgc
cacagcggaaaactcctgagccactttggtattgccacccgaaaaatcgcgctgcatgat
cataatgaacgtgaccgcgcgcaatggattgttgaaaaactccaagctggtgaatcgatt
gcattgatttcagatgctggtaccccgttgatttcagatcccggctatcacttagttaag
catgtgcgtgaagctggcttcgatgtgatccctttgcctggaccatgcgcggcgattacg
gctttaagtgcatctggtttgccctcggatagattcagctttgagggtttcttgcccgcc
aaagaaaaaggtcgctgcgataaactcgaagccctgcgtgaagatccgcgcaccttgatt
ttttatgagtcacctcatcgcatcgagcaaagcttagcctcgatagtgcaagtgctgggt
gaagacaggcaaatggtgatggcccgcgaagtgaccaaaaccttcgagacgtttttatct
ggcacagcccaggaaattcttgacatcgtccgtcacgatcccaatcagcaaaaaggtgaa
attgtactcatgtgtcacggctttgtgactcaagatgaagaggccattcctaccgtagcg
ctaaataccttaaccttgttatgcgaagaattaccattgaagaaagccgcagcgatagcg
gcgcaaattcacgggttgaagaaaaatgccctgtataaatatggtttaagcatagattta
tag
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