KEGG   Shewanella denitrificans: Sden_0291
Entry
Sden_0291         CDS       T00344                                 
Name
(GenBank) ERCC4
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sdn  Shewanella denitrificans
Pathway
sdn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Sden_0291
   03460 Fanconi anemia pathway
    Sden_0291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdn03032]
    Sden_0291
   03400 DNA repair and recombination proteins [BR:sdn03400]
    Sden_0291
DNA replication proteins [BR:sdn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    Sden_0291
DNA repair and recombination proteins [BR:sdn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Sden_0291
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-ProteinID: ABE53587
UniProt: Q12SI9
LinkDB
Position
complement(324467..324979)
AA seq 170 aa
MADTAFLQRKMVLYYDDRGHADTLIHELSRYQDVSLVKKRLTLGDYQCHDWLIERKTLAD
LVHSLCDGRLFSQVARLAASSHHTALLIEGCAQDIANYQIHREALMGAICAITLNFHIPI
LRSLSQRETAKVLYFCITQLYRNDTDLQLTGRKPKRKKVANFLYYKVCLM
NT seq 513 nt   +upstreamnt  +downstreamnt
ttggctgatacagcatttttacagcgtaaaatggtgctctattatgacgatagggggcac
gccgacacccttatccatgagttatcccgctatcaggatgtatctctcgtcaaaaagcgg
ctaacgctcggtgattatcaatgtcatgattggcttattgagcgaaaaaccttggccgac
ttggttcattcactatgtgatggacgcttattctcacaagtggctagattggcagcaagc
tctcatcataccgctctgctcatcgaaggctgcgctcaagatattgccaattaccaaatc
caccgagaagcccttatgggggcgatttgcgccattacactcaattttcacatcccaata
ctgcgaagcctatcacaacgtgaaacggcaaaagtactgtatttttgcatcactcaatta
taccgtaatgacactgatttgcagcttactgggcgtaaacccaagcgcaaaaaagtcgcc
aactttttatactacaaagtttgcctgatgtag

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