Shewanella denitrificans: Sden_0340
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Entry
Sden_0340 CDS
T00344
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_0340
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_0340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
Porin_2
Motif
Other DBs
NCBI-ProteinID:
ABE53635
UniProt:
Q12SE1
LinkDB
All DBs
Position
380353..381705
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AA seq
450 aa
AA seq
DB search
MKKTVLTLAISALVVGSTAPVNAAGFQLAEYSATGQGRAFAGEAAMADNASTQARNPAML
SYLEGQQVSLGGIYVMTNVDVDGDVSLRSPLFGSAEVVIPADGKDVAASALVPNFYYANP
LNEDWTLGLGVNSNYGLATEVPADHAAAIFGSHTSVKTVEFNPNLAYRVNDAFTLGAGAR
LVYGEGEISASTPAWISAIGSHPNVPASIAARLPSAGTQLKSMQGDDIGYGWTLGSSWQI
NPSHRLGLAYHSGVELELAGSAAGLSYTGGQDVAIEGYLPLELPAFAELASYHELTEKLA
IHTSVNWTQWSVFERLVAHFPGDVKPVGNLETDLVKEENFKDNWRFALGSSYQASNALLV
RAGVALDKTAVDDAHRTTTIPDSDRLWLSTGAAYQVSKNLMIDFAVTYIRSIGDAPISES
QNLLGLAEIGFNGEASGDVWLVGSQLSYTF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccgtgttaaccttggccatcagtgccttagtcgtaggttcaactgcgcca
gtgaatgccgcaggtttccagctggctgaatactctgccacaggtcaaggccgagccttt
gctggcgaagccgctatggctgacaatgcctcaactcaagcgcgtaaccctgccatgtta
agttaccttgaaggccagcaagtctccttgggtggtatttacgtgatgacgaatgttgac
gtagatggtgatgtctccctacgctcacccttatttggttcggctgaagtggtgatccct
gccgatggaaaagacgttgccgccagtgcgttagttcctaatttttactacgctaatcca
ctaaatgaagattggactctgggccttggggtgaattccaactatggattagccacagaa
gtgcccgcggatcacgcggccgccatctttggtagtcacacttcggtgaaaacagtcgaa
ttcaatcccaatcttgcttaccgcgtaaatgatgcgttcactttaggtgcaggcgcgcgc
ttggtgtatggcgaaggtgaaatatcagcaagcacccctgcttggattagcgctataggc
agtcatcccaatgtccctgctagcattgcagcacgtctgccgtcagcaggtactcagctt
aagtctatgcaaggtgatgacataggttatggctggacgttaggttcaagctggcagatt
aacccaagtcacagactcggcttggcttatcacagcggagtggagcttgagcttgcaggt
tctgcggcagggttaagctatactggtggccaagatgtggctatagaaggttatttaccc
cttgaactgcccgcttttgcagaacttgcctcttaccatgagctgacagagaagcttgcc
attcataccagtgtgaactggactcagtggagtgtatttgagcgtttagtggcacatttc
ccaggtgatgtgaagcctgtgggcaaccttgagacagatctggttaaagaagaaaacttc
aaagataactggcgctttgccttaggttcaagctatcaagcgagcaatgctttgttagtt
cgtgcgggtgtagccttggataaaaccgctgtggatgacgcccatagaaccaccaccatt
cccgattcagaccgcctatggttaagtactggtgcggcttatcaagtctcaaaaaatcta
atgattgattttgctgtgacttatattcgttctatcggtgatgcgccaatcagcgagagc
cagaacttattgggcctggcagaaattggctttaatggtgaagccagtggcgatgtgtgg
ctagtaggtagccagttgagctatacgttttaa
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