Shewanella denitrificans: Sden_0351
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Entry
Sden_0351 CDS
T00344
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00300
Lysine biosynthesis
sdn00550
Peptidoglycan biosynthesis
sdn01100
Metabolic pathways
sdn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sden_0351
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sden_0351
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sden_0351
Enzymes [BR:
sdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Sden_0351
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
CoaE
Motif
Other DBs
NCBI-ProteinID:
ABE53646
UniProt:
Q12SD0
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All DBs
Position
391611..392984
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AA seq
457 aa
AA seq
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MIELTLDALAQKLNAKHLGENLTIANVSTDSRAIPAACLFVALKGERFDAHDFAATAIEN
GAKALLVERELALDIPQLIVANSQKAMGEIGALVRDIVSPICVALTGSNGKTSVKEMLAS
ILSQGHQVLYTAGNFNNEIGVPLTLLRLSQADEYGVFELGANHKGEIDYTSSLVRPRVAL
VNNIGSAHLEGFGSIEGIAEAKSEIFNHLSADGVAVINADDAFCELMKTKAKAFKQLSFS
REANTNADIQATGLNMNAAGCYGFTIHYQGQQLAVQLPLAGIHQVSNALAASAMCLALGI
SLTDIVSGLARLAPVKGRMQPHTLGRLLVIDDSYNANPSSVSAAIDWLKNRDGFCCLVLG
DLGELGDNAAHLHAQVGQQAKEAQIDALFCCGSLSENTSLAFGSPHYAELPALLVELTSA
IKANRGAVTVLVKGSRSARMERVVENLLNAYEHGELA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattaaccttggacgcattagcccaaaagttaaatgccaagcaccttggagaa
aacctcaccatagccaatgtgagcacagacagccgcgcaatacccgcagcctgtttattt
gtggcactcaaaggtgagcgtttcgatgcccatgattttgccgccacggccatagaaaat
ggtgccaaggccttgttggtggagcgcgagcttgcgctggatattcctcagctcatagtg
gcaaatagccaaaaagccatgggtgaaatcggcgcgctagtgcgagatattgtctcgcca
atatgcgtggcgctgaccggctcaaacggtaagacaagtgtaaaagaaatgcttgccagt
attttatctcaagggcatcaagtgctttacaccgccggtaattttaataatgaaatcggt
gtgccgttaaccttattgcgattaagccaagctgatgaatacggagtatttgagctggga
gctaatcacaagggcgaaatcgattacacctcttcattagtgcgcccgagagtcgcctta
gtgaacaacattggcagtgctcatttagaaggctttggctccatagaagggatagccgag
gctaagtctgagatatttaatcacctaagtgccgatggtgtagcagtcattaatgccgat
gatgcattttgtgagctaatgaaaaccaaggccaaggcgtttaagcagttgagtttttcc
cgtgaagctaatactaacgcagacattcaagccactgggcttaacatgaatgctgcgggc
tgctatggctttactattcactatcaagggcagcagttggctgtgcaattgcctttggcc
ggtattcatcaggtcagtaatgcactggcagccagtgccatgtgtttagccttaggcatt
agcttaactgacatcgttagtggcctggcaaggcttgcaccagtgaaaggccggatgcag
cctcataccttagggcgcctgctggtcatagatgacagttataacgctaaccctagttct
gtcagcgccgccatcgactggcttaaaaatcgtgacggtttttgttgtttagtgctggga
gatttgggcgaattaggcgacaatgcggcccatttacatgcacaagtcggccaacaagca
aaagaggcacaaatcgatgcgctattttgctgtggcagcttgagtgaaaataccagttta
gcctttggcagcccgcattatgctgagctgcctgctttgcttgtggaattaacctcggcg
attaaggccaatcgcggcgctgtgactgtgttagtcaagggctctcgcagtgcgcgcatg
gaaagagtggtagagaatttattaaatgcttacgagcatggggagttagcgtag
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