Shewanella denitrificans: Sden_0353
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Entry
Sden_0353 CDS
T00344
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00470
D-Amino acid metabolism
sdn00550
Peptidoglycan biosynthesis
sdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sden_0353
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sden_0353
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_0353
Enzymes [BR:
sdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Sden_0353
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Precursor biosynthesis
Amino acid ligase
Sden_0353
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABE53648
UniProt:
Q12SC8
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All DBs
Position
394074..395396
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AA seq
440 aa
AA seq
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MQTQFTHIVLGLGATGLSVVRYLVSQGIKPLVMDSRRNPPGADVLAQEFADIELITGGFD
CRYLVQAQQLVISPGIAIDTPEVRAAMDMGIEVIGDVELFARAIADKKPCVIGITGSNGK
TTVTTLVYEMLLAAGLKVAVGGNIGTPALDLLAMDVDYYVLELSSFQLETTYSLNCIAAT
CLNISEDHMDRYSDLTAYRNAKLRLYDQSRFIMYNLDDELTYPHEPMNQNHFGLGVPDGD
AWGLGDGKIYHGDSDIINLIDVALIGSHNHGNLLAAMALVHACGVEKEPMVTVAKTFSGL
SHRCELVAVKQGVSYINDSKATNVGATVAALEGLSTHLGEVYLIAGGDGKGADFRPLTQA
LSNVVQLITLGRDGHKLAKLKPGAIEVATMAEAVAKAAEMAYSGDIVLLSPACASLDMYK
NFMARGDDFRQLVEQLPDGV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcaattcacgcacatagtactaggactgggggccacagggctttctgtagtg
cgttatttagtgtctcaaggcatcaagcccttggtgatggatagcagacgcaatcctcct
ggggccgatgtattagcacaagagtttgccgatattgagctgattactggtggtttcgat
tgccgttatttagtccaggcacaacagctagtgataagcccaggtattgccatagatacc
ccagaagtgcgcgcggcgatggacatgggcatagaagtcataggtgatgttgagctgttt
gctcgcgccattgccgataaaaagccctgcgtgattggcattaccggctcgaacgggaaa
accactgtcaccactttagtctatgaaatgctgttggcggcggggttgaaggttgcagtt
ggcggcaatataggcacgccagcattagatttgctcgccatggacgtggattattatgtg
ctcgaattatcgagttttcagctagaaaccacctatagccttaattgtatcgccgcgacc
tgtttaaatatttcagaagatcacatggacagatacagtgatttaaccgcttatcgcaat
gctaaattgcgcctatacgatcagagccgtttcatcatgtataacctagatgatgagctg
acttacccccatgaacccatgaatcaaaaccattttggtttaggggtaccagatggtgat
gcttggggcttaggtgacggtaagatatatcacggcgatagcgacatcattaacctcata
gatgtggccttaattggcagtcataaccatggcaatctactggcggcaatggcgttagtg
catgcctgcggcgtcgaaaaagagcccatggtcacagtggctaagacatttagcggcttg
tcccatcgctgtgagttggtggcggttaaacagggcgtgtcttacatcaatgattctaaa
gcgactaatgttggcgctactgtggcggcattagaaggcttaagcactcatcttggtgaa
gtgtacttaattgccggaggtgacggtaaaggcgctgactttaggcctttgactcaagcg
cttagcaatgttgtgcagcttattactttgggcagggatggccataaactagcaaaatta
aagccaggcgccattgaagttgccaccatggcagaagcggtagccaaagccgctgaaatg
gcatattcaggcgacatcgtcttgctatcacccgcctgcgccagtttagacatgtataag
aattttatggcaaggggtgatgactttaggcaattggtggagcagctccccgatggtgtc
taa
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