Shewanella denitrificans: Sden_0356
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Entry
Sden_0356 CDS
T00344
Name
(GenBank) UDP-N-acetylmuramate--L-alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00550
Peptidoglycan biosynthesis
sdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sden_0356
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_0356
Enzymes [BR:
sdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
Sden_0356
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Precursor biosynthesis
Amino acid ligase
Sden_0356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
F420_oxidored
MurD-like_N
BRCT
Motif
Other DBs
NCBI-ProteinID:
ABE53651
UniProt:
Q12SC5
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All DBs
Position
397702..399141
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AA seq
479 aa
AA seq
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MTNTEKYKQLRSMIPEMRRIKHIHFVGIGGAGMGGIAEVLVNEGYHISGSDIATNSVTDR
LISLGAKVIIGHHADSVEHADVVVVSTAINHENPEIIAAKERRIPIVRRAEMLAELMRYR
HGVAIAGTHGKTTTTSLIASVYAQAQRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESD
ASFLHLQPMVSVITNIEADHMDTYGGDFEKLKTTFVDFLHNLPFYGVAVMCIDDEINREI
MPRVGRQIVTYGFSQDADVQALNFNQIGHQSQFVVRRKDKEDLALVLNLPGEHNVLNALA
AIAVASEDDIDDESIVKALAEFEGIGRRFQHLGEFNTANGQVMLVDDYGHHPSEVLATIK
AARAGWPDKRLVMAYQPHRYSRTRDLYDDFVEVLSQVDCLLLLDVYSAGEAAIPGADGRA
LCRSIRLRGQIDPIFVASPDQLASVLPDVLQAGDLLLTQGAGNIGALSKLLASTNLGFE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatacagagaaatacaagcaattacgtagcatgatcccagaaatgagacggatc
aagcatatccatttcgtcggtattggcggcgcgggtatgggcggtattgcagaagtgtta
gtcaatgaaggctatcacatcagtggctcagatatagccaccaacagtgtgaccgacaga
ttaattagccttggagccaaagtgattattggccaccatgctgacagcgtagaacatgcc
gatgtggtggtggtatcgacggcgattaatcatgaaaacccagaaatcattgctgccaaa
gagcgccgtattccgattgttcgccgcgccgagatgctcgccgaactgatgcgttatcgt
catggggttgccattgctggcacccatggtaagacgaccaccacgagtttaattgctagc
gtgtatgcccaggcacagcgtgaccctacttttgtgattggcggtctgcttaatagcgca
ggcaccaatgcccgtttaggcacgagtcgctacttgattgccgaagcggatgaaagtgat
gccagcttcttgcatctgcagcctatggtgagcgtaatcactaacattgaagccgaccac
atggacacctatggcggcgattttgagaaattaaaaaccacctttgtggactttttgcat
aacctgcctttctatggggtggcagtcatgtgtatcgatgatgaaatcaaccgtgaaatc
atgcctagggtgggccgtcaaattgtcacctatggttttagtcaagatgccgatgtgcaa
gcattgaattttaaccagattggtcatcaaagccagtttgtggtccgtagaaaagacaaa
gaagacttagccttagtgcttaacttacctggcgagcacaatgtgctcaatgcattagcg
gcgattgccgttgccagcgaagatgatatcgatgatgagtctatcgttaaggcattagct
gagtttgaaggcataggtcgccgattccagcatttgggcgaattcaacacggccaatggt
caagtgatgttggtggatgactatggtcatcaccctagtgaagtgttggcgaccatcaaa
gccgcccgtgccggttggccggataagcgcctagtgatggcgtatcagccccacagatat
agccgtacccgtgacttatatgatgattttgttgaagtcttgtctcaggtcgattgcctg
ttattactggatgtctactcggcaggtgaagcggcaattcctggtgcggatggacgggcc
ttatgtcgctccattcgcttgcgtgggcagatagaccctatttttgtggcaagtccggat
caactagccagtgtattaccggatgtattacaagctggggatttactcttgactcaaggc
gctggcaatataggcgccttgtcaaaactcttggcaagtacaaatttaggcttcgaatag
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