Shewanella denitrificans: Sden_0470
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Entry
Sden_0470 CDS
T00344
Name
(GenBank) TonB-dependent copper receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_0470
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_0470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABE53762
UniProt:
Q12S14
LinkDB
All DBs
Position
539772..541763
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AA seq
663 aa
AA seq
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MGKTNFKLSLLAGALVMAMQPSVQAQEQHNCTKDEKCNDYLVVTGDVMREPVNVVSDPKK
PRLPLPAFEGSGFLKTIPGFSVTRKGGMGGDPSFRGMGGSRLAIVDDGQHVYGACGGRMD
PPTNYIYPESYDEITVIKGPQTVKYGPVGSAGTVLFEKNRHRFTERGIIGRASITGGSFD
RKDSIIEFVAGNADYYVDFDMDSSSSDHYKDGNDNPVQSSYDRDNIKVALGWTPSENTVI
EFAMGQSEGEAEYADRLNKARQIDNESYTLLVQHDFDSELLKNVDFQVYSNENDHIMDQF
DRGVNMGMDVMRSTSGGHFWLGLTPMMNWDLTLGVDHMQSDHQGRGINMMQDKGLDDLLR
KPFMKNMEYANWGLFVESVYHLDHSKVFAGMRYDNWDTDLYVGQKGNRADDVFSGYARYE
YRDGFSQYYAGVGHAERVPDYWEIMKTSASNPMQKSFDLEPEETNQLDIGWIYDNGLVFS
SSLFYGKLDNYILVDSTGPMTVARNIDATLYGGEASIDYDVNEHFSAQVTLSYTLGDNDT
DNVDLGQVSPLESKFSLNYQKDAWAAGLLWRVVDSQHRVTIGHGNIVGQDLAESSGFGTV
AINASWNYDDHLRLILGVENLFDIAYAEHISKAAGGNDLPGSEPMFQVNESGRNFWAKLT
YEF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaccaacttcaaattaagcttattagcgggcgcgttagtgatggcgatgcaa
cccagcgtgcaggcacaagagcagcacaattgcactaaagatgaaaagtgtaacgattac
cttgtggtcacaggggatgtgatgcgcgagcctgttaacgtggttagcgatcccaagaag
ccacgtttgccactgcccgcatttgaaggttcaggttttttgaaaaccattccaggtttt
agtgtgactcgtaaaggcggcatgggcggcgacccctcatttcgcggtatgggaggatca
cgtcttgcgatagtcgatgatggtcagcacgtgtatggcgcctgtggtggccgtatggac
ccacccactaattacatatatccagaatcctatgatgaaattaccgtgataaaaggtccg
caaacggtgaaatatggtcccgtgggctcagcgggcactgtcttgtttgagaaaaatcgc
catcgctttaccgaacgcggcattattggccgcgccagcatcactggcggcagttttgat
agaaaagacagcatcattgaatttgtggcgggtaatgccgattattatgtcgattttgat
atggacagctccagcagcgatcactacaaggacggtaacgataatccagtgcaatcaagc
tacgacagagacaatatcaaggtcgccttgggttggacaccgtcagaaaatactgtgatt
gaattcgcaatgggtcagtcagaaggtgaggctgaatatgcggatcgccttaacaaggcg
cgccaaatcgataacgaaagttataccttgttagtgcagcatgatttcgattcagagcta
ctaaaaaatgttgattttcaagtttatagcaatgaaaacgatcacatcatggatcagttt
gatcgcggcgtaaacatgggcatggatgtgatgcgcagtaccagtggcggccatttctgg
ttagggttaacccctatgatgaattgggatctcaccctgggggtcgatcatatgcaaagc
gatcaccaaggccgcggcatcaatatgatgcaagataaaggcctggatgatttgctgcgt
aagccgtttatgaagaatatggaatacgccaactggggcttatttgttgaatctgtctat
catcttgaccacagcaaggtatttgctggtatgcgttatgacaattgggataccgatctc
tatgtgggtcaaaaaggcaatcgagctgacgatgtatttagcggttacgcccgttatgag
taccgtgatggtttcagccaatattatgccggtgtaggtcacgctgagcgggtgcctgat
tactgggaaatcatgaaaaccagtgccagcaatccaatgcaaaaatcctttgatcttgag
cctgaagaaaccaatcagctggatatcggctggatctatgacaatggcttagtgttttca
agctcattattctacggcaagttagataactacatcttagttgactcaaccggcccaatg
acagtggcccgtaatatcgatgcgaccttgtacggcggtgaagccagcatagattatgat
gttaacgaacacttttcggcccaagtgaccttaagctacaccttaggtgataacgacact
gataatgttgacttaggtcaggtgtcaccgcttgagtctaaattttcactgaactatcaa
aaagatgcatgggctgcaggactcttgtggcgagtggttgattctcaacatcgagtgaca
atcggccatggcaacatagtgggtcaagatttagccgagtctagtggttttggtacagtt
gccatcaatgcttcgtggaattatgacgaccacttacggttaattttaggggtagagaac
ctgtttgatattgcttacgccgagcacatcagtaaagcggcgggtggcaatgacttaccc
ggcagtgagcctatgttccaagtgaacgaatcaggccgtaacttctgggctaaattgact
tatgagttttaa
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