Shewanella denitrificans: Sden_0521
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Entry
Sden_0521 CDS
T00344
Name
(GenBank) primary replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sden_0521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdn03032
]
Sden_0521
Enzymes [BR:
sdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Sden_0521
DNA replication proteins [BR:
sdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sden_0521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
GvpD_P-loop
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABE53813
UniProt:
Q12RW3
LinkDB
All DBs
Position
590199..591605
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AA seq
468 aa
AA seq
DB search
MSQQGAFKPKKKPRDAQIDALKLPPHSIEAEQSVLGGLMLDAEAWDRVTEAVVAEDFYSR
SHRMIFAAMNRLVETGQPIDLITVSEQLEIEDQLEDAGGFAYLGEIAKNTPSAGNIVSYA
EIVRERAVVREMIHVAHEIADAGYHPEGRDSSALLDLAETKVFKIAEKRTNANEGPEGIK
SILEKTVDRIEKLYNNPHNGVTGVSSGFGDLDKMTAGFQGGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI
MLEQGKMYIDDGSGLTPTDVRSRARRIAREYGGLSMIMVDYLQLMQVPSLSDNRTLEIAE
ISRSLKALAKELNIPVIALSQLNRSLEQRADKRPINSDLRESGSIEQDADLIMFIYRDEV
YHDDSEDKGTAEIIIGKQRNGPIGRVRLTFQGHYSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaaggtgcttttaagcccaaaaagaagccaagagatgcacaaatcgacgcg
cttaaactgccaccccattccatagaggctgagcaatcagtgctcggcggtttgatgtta
gatgcagaggcttgggatagagtgaccgaagccgtggtggctgaagatttttattctcgt
tcgcatcgaatgatttttgcggccatgaaccgtttagtggaaactggccaaccgatagat
ttgatcacagtttctgaacaacttgaaattgaagatcagctggaagacgctggcggcttt
gcctacttaggtgaaatcgctaaaaacacccccagtgccggcaatatcgtgtcttacgcc
gagattgtgcgtgagcgcgccgtggtacgtgagatgatccatgtggctcatgaaatcgcc
gatgcgggttatcacccagaaggtcgcgactctagcgcgctattagatttggccgaaacc
aaggtcttcaaaatcgccgagaagcgcaccaatgctaacgaaggccccgagggcatcaaa
agcattctagaaaaaaccgtcgaccgtatcgaaaagctctataacaacccccataacggt
gttactggggtatccagtggttttggcgatttagataagatgaccgcaggtttccagggc
ggcgatttgattattgtggcggcccgtccttctatgggtaaaaccaccttcgcgatgaac
ttgtgtgagcaagcggcgatgaatgaagacaagcctgtgcttattttcagcctcgagatg
ccttcagaacagatcatgatgcgtatgttggcctcactgggccgagtggatcaaaccaaa
attcgtaccggtcagctggacgatgaagattgggcgcgggtatcatcgaccatgggtatc
atgcttgaacaaggcaagatgtacatagacgatggctcaggcttaaccccaacagatgtg
cgcagccgtgcaaggcgtattgcccgtgagtatggcggtttgtctatgatcatggtggat
tacttgcagttgatgcaagtgccgtcgttatcggataaccgtaccttggaaatcgccgag
atttcccgctcccttaaggcattggcgaaagagttaaatattcctgttattgccctgtcg
cagcttaaccgctccttggagcaaagggccgataaacgcccgattaactcggatttgcgt
gaatcgggttctattgagcaggatgccgatttgattatgtttatttatcgtgatgaggtc
tatcatgatgattctgaagacaaaggcacggcagaaattattattggtaagcaacgtaac
ggccctattggtcgagtgcgattgaccttccaaggccattattcgcgctttgataattac
gctggccctcagttcgaagaagactaa
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