Shewanella denitrificans: Sden_0542
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Entry
Sden_0542 CDS
T00344
Name
(GenBank) UBA/THIF-type NAD/FAD binding fold
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_0542
Transfer RNA biogenesis [BR:
sdn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sden_0542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
Pyr_redox_2
DAO
Shikimate_DH
NAD_binding_7
NAD_binding_3
3HCDH_N
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
ABE53834
UniProt:
Q12RU2
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All DBs
Position
615955..616749
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AA seq
264 aa
AA seq
DB search
MLSESYLSRFAGIGRLYGQDALVKFSQSHVMVIGIGGVGTWVAEALARSGIGQISLMDLD
DICVTNSNRQSHALASTIGQSKVAVMAARLRDINPECKVNEIEDFLTLDNLGEHLVPKAE
GGELDFVVDCIDAVKQKAALIAWCKRNKLPLVTVGGAGGQTDPTQIQLLDLSKTYQDPLL
AKVRNILRKDYNFSKNPQRRFAVDAVFSSQHLVYPQNDGSVCNTKAGADGSMRMDCASGF
GAVTMVTGTFGFVAASRVLAKLAL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagaatcctatctttctcgtttcgctggtattggccgcctctatggtcaagat
gccttggtcaaattctctcaatctcatgtgatggttatcggcataggtggggtagggact
tgggttgccgaagcgttagcaaggagcggcataggacagataagcctgatggatttagat
gatatttgtgtcaccaatagcaatcgtcaatcccacgcgctggcgtccaccataggtcaa
tctaaggtggctgtgatggctgcgcgccttagggatatcaatcctgagtgcaaggtgaat
gaaattgaagattttctgaccctagataatcttggcgagcatttagtgcctaaggccgag
ggcggtgagctcgattttgtggtcgactgtattgatgcggtaaagcaaaaagccgcctta
atcgcttggtgtaaacgcaataagctacctttagtgacagtcggtggtgcgggggggcaa
acggatcccactcaaattcaattgctcgatctttcaaagacctatcaagacccattactg
gcaaaagtgcgaaatatacttcgaaaagattataacttctctaaaaacccccaacggcgt
tttgccgtcgatgcggtgttttcgagtcagcatttagtgtatccacaaaatgatggcagt
gtctgcaacactaaggctggagccgatggcagtatgcggatggattgtgcgtcaggattt
ggcgccgtcactatggtaacgggcacctttggctttgtggcggcgagccgagtattggcg
aaattggcgctataa
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