Shewanella denitrificans: Sden_0729
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Entry
Sden_0729 CDS
T00344
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_0729
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_0729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF5405
Motif
Other DBs
NCBI-ProteinID:
ABE54019
UniProt:
Q12RA7
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Position
843047..845017
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AA seq
656 aa
AA seq
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MGTKPTKISLSLTAILGLSTLASPLYAAPVSEQGVKLDDTMTVIGRSDKSTLSIAANVTV
LDASDIETSGATNLVQLLRSRSGIQVTDSNSGAVFAMRGFNAEQAANNTLVLIDGRRLNN
IDIAAPSLDAIALNQIERIEILSGSAGVLYGDQAVGGVINIITKSSEHTRAGLQVSAGSF
DTTEYQGDVAGAINEQWRYVAAANYKESDNYRDHNESETGSVFGRLDYQSAETHFYSEVS
YYDNDRQLTGGLSQAEFNANPRRAPLTSVDDYQHEIATAVRSGYHQQASENWVLGGDMSY
TDSNTHYTNFGFAGDNKRNQLSVMPKAVATFSTSKGSLDLVTGIDYHLSESEFSWGRSNT
QTQQAAYVQATVPLATSLSYVVGGRYAKAEDELVDGSAYPNGAELDQDAKAFELGLNYRP
YASQRLYVRAEDNFRFAKVDEQAYTSAGVIGLKPQTGRSYEAGWDLILASHVVKLSLYRL
SLEDEIVFDPSAPKPNGGFFDGANVNADASRRYGASANWDWQLMTDLAWGVEYHYVDAQF
TQGANKDKALSWVASHSGRSYLSYDINDEWQFYTEASYTGKRYLGGDNGNLEPELDSYLL
TNMALHYRKAMWSASVRLDNLFDEEYASAGFYSAWGSHGFYSGDGRSIRLTAGYRF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgggtactaaaccaacaaaaatttcattatccctgacggccattcttggcctctctacg
ctggcttcaccgctttatgccgcgcccgtgagtgagcagggtgtcaaacttgatgacact
atgactgttataggtcgcagtgacaaatccacattaagcatagccgctaatgtcacagtg
cttgatgctagcgacattgaaaccagtggcgccaccaatttggtgcagctattgcgcagc
cgcagtggcatacaagtgactgacagtaattcaggcgccgtgtttgctatgcgtggcttt
aatgccgaacaagcggctaataataccttagtgttgatcgatggacgccgtcttaacaat
attgatatcgccgccccaagcttagatgccattgcgcttaatcaaattgagcggattgag
attttgtctggcagtgccggtgtgctctatggcgatcaagctgtgggcggggtgattaat
attatcactaagtcttctgagcatacccgcgctggcttacaagtctcggcagggagtttt
gataccactgaataccaaggtgatgtcgcaggcgcgattaatgagcagtggcgttatgtg
gcggcggccaattataaagagtctgataattatcgcgatcacaatgaaagcgaaacaggt
tcggtttttggccgattagattatcagtctgcagagacgcacttttattcagaagtgagt
tattatgataacgatcgccagttgaccggcggattaagccaagctgagtttaacgccaat
ccaaggagagcacctttaaccagtgttgatgactatcagcatgaaatcgccacggctgtg
cgcagcggttatcatcaacaagcctcagaaaactgggtgctgggcggtgatatgagctac
acagattcaaatacccattatactaattttggttttgcaggtgataacaagcgtaatcaa
ttgagcgtaatgccaaaagctgtggcgactttctctacctcaaaggggagtttagaccta
gtgacggggattgattatcacttaagtgagtctgaatttagttggggtcgcagcaatact
cagacccagcaagcggcctatgtgcaagcgacagtgccactagccaccagcctgagctat
gttgttggcggccgctatgcaaaggcagaagatgaactcgtcgatggcagtgcatatcct
aatggtgccgagcttgatcaagatgctaaggcctttgagcttgggcttaattaccgccct
tatgcatcccaacggttatatgtgcgcgctgaagataacttccgctttgctaaagtggat
gagcaagcttacacctcagcaggtgtgatcgggcttaagccacaaacgggtcgctcctat
gaggcgggttgggatttgatacttgcaagtcacgttgtgaaacttagcttgtatcgcctt
agccttgaagatgaaatcgtgttcgatcctagtgcgccaaagccaaatggcggcttcttt
gacggagctaacgtgaatgccgatgcatcacgccgctatggcgcgagcgccaattgggat
tggcagctgatgacggatttagcttggggcgttgagtatcattatgttgatgcgcagttc
actcaaggtgcaaacaaggataaggcactgtcatgggtagcttcgcacagcggcagaagt
tacttaagttatgacataaacgatgaatggcagttctataccgaagcaagttataccgga
aaacgctatttaggtggcgataatggtaatcttgagccagaattagacagttatttattg
accaatatggcactacattatcgcaaggctatgtggtcagcgagtgtaaggttagataat
ctctttgatgaagagtatgccagtgctggtttttatagcgcatggggcagccacggtttt
tattctggtgatggacgcagcattcgcttaaccgcgggttatcgcttctaa
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