Shewanella denitrificans: Sden_0738
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Entry
Sden_0738 CDS
T00344
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_0738
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_0738
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABE54028
UniProt:
Q12R98
LinkDB
All DBs
Position
856063..858606
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AA seq
847 aa
AA seq
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MKKIFLWPSACALAVSVSITPNVIAAEKSVERIEVTGSRIKRTDIEGPSPVQSINKDDIA
NMGFDNLQQLLERMPANGSGAFSTRGNSQDSTANGGASISLRGLGPDATLVLINGRRVGA
SAFAEGISNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNIILRKDIEGIELSL
GYGDDNGTGYDETKGSLVWGVKADKGSASIILDYFTNGTLSAEDMGRFGTANQSPYGGDD
SRSSRGFPGYFYVNGVQTIDPDCPADSIDGEYCLFDYGPYNMTIPTSERVGAIGQFDYML
GDDLTAFLELSVQHNTSEAGGAPTPLDEKAKMTVPGTHPNNPWGQDIKIGRFRTVDAGAR
RWDIESDTMRVVAGLRGVVNDWDWEVSAQRGRSESTQTGDRSQGWVRTDFLQAEIDAGNY
NPFGGTINSQDVIDRITTNLVRQGKSSITAYDASISGHAFTIADRDIMMAAGAEYREESV
SDVPDDQFQRGLIFGTEAVSAFGSRDQHAAYVEFSIPVADNFELQLAGRYDSYSDFGSTT
NPKIAFQWGISDEVTARGSWSTGFRAPSLAQIGLGPSEKSDFLVDRYRCAADNLDCGKLD
YNFLFAGNPDLEAEESETWNLGMIWAPSQQFDIGFDIFNILQDNKIDALQNKDLYAANCN
DQNSTVCRRTAPQAGQTFGSIDVIQSAFINIGSQEVQGVDLSTHYGLELDNYGDIKFGVE
YSYLISFEKEIDGKTIDYTGEYEYPQHRWLATTNWNMDDFAANVNFSYIGEFEDFNKTRT
VDAQLLVDMSGSYRFNDTVKLTLGVNNLFDEEPSFAIGDGDADLYGYAMGVHNPLGRYIY
TKVTMNF
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattcttatggccaagtgcttgcgccctcgcggtgtcagtctctatcact
ccaaatgtaattgctgctgagaaaagtgttgagcgtatagaggtgacaggatcacgtatt
aagcgtaccgatattgaagggccatcgcctgtccaatctatcaataaagacgatatcgct
aacatgggttttgacaacctacaacaattactcgagcgcatgcctgcaaacggttccggt
gcattctcaactcgtggaaacagccaagattctaccgctaatggtggagcatcaatcagt
ttacgtggcttaggacctgatgccaccttggttcttatcaatggtcgccgtgttggcgcg
agtgcttttgctgaaggaatttcgaattcgtttgtcgatatcaataatatccctgtttcg
gccattgaacggattgatattctcaaagatggtgcatcagctatttatggttccgatgcg
attgccggtgtagtcaacattatcttaagaaaagacattgaaggtattgagcttagcctt
ggttatggtgatgataatggtactggttatgatgagacaaaagggagtttagtatggggc
gtaaaagccgataaaggcagcgcgtcaattatccttgattactttaccaatggcactttg
tctgcagaagacatgggccgctttggtaccgctaaccaatcaccttacggcggtgacgat
tctcgttcatcacgtggcttccctggctatttttatgttaatggcgtacaaactattgac
cctgattgcccagcagatagcatcgatggtgaatattgtttatttgactatggtccatac
aacatgaccattcctacctctgaacgtgtgggcgctattggccaatttgattacatgtta
ggtgatgatttaactgcatttttagagttgtctgtacaacacaacacttctgaggccggt
ggtgcaccaacgccactggatgaaaaagcaaaaatgacagtaccaggcacccatcctaat
aatccatggggccaggatattaaaataggccgttttagaaccgttgacgctggtgctcgt
cgttgggatatcgagtcggataccatgcgtgtggttgccggacttcgcggtgtagttaat
gattgggattgggaagtgtcagcgcaacgtgggcgcagtgaatcgactcagacaggggat
cgcagccaaggttgggtgagaacagatttcctacaagccgaaattgatgcgggcaactac
aatccatttggcggcactatcaattcgcaagatgtgattgaccgtattaccaccaattta
gtaagacaaggtaagtcaagcatcacagcttatgatgccagcatttctgggcatgcattt
accattgctgatcgcgatattatgatggctgccggtgccgagtatcgcgaagaaagcgtc
agtgacgtgcctgatgatcagtttcaacgtggtttgatttttggtactgaagctgtatct
gcgtttggttcacgagaccaacatgctgcctatgtagaattctctattcctgttgcggat
aactttgagctgcagttagcgggtcgttacgatagctacagtgattttggttcaactact
aaccctaaaattgccttccagtggggtattagtgacgaggtaaccgctcgtggttcttgg
tctaccggtttccgtgcaccatcgttagcgcaaattggtcttggtccatctgagaaaagt
gactttttagtggatagatatcgctgtgctgccgataatctagactgtggaaaacttgac
tataatttcctgtttgccggtaaccctgaccttgaagctgaagagtctgaaacgtggaac
ttgggtatgatttgggcacccagtcagcagtttgatattggttttgatatattcaatatc
ttacaagacaacaagattgacgcgctgcaaaacaaagatctttatgccgcaaattgtaat
gatcaaaacagtaccgtttgccggcgaacagcgccccaagctgggcaaacatttggttcg
attgacgtgatccaatcagcctttatcaacattggttcgcaagaagtacaaggcgtggat
ttatcgactcattatggtcttgaactagacaactacggcgatattaagtttggtgtagag
tacagctacttaatcagttttgagaaagaaattgatggtaaaactatcgattatacaggc
gagtatgagtatccacagcacagatggttggcgacaaccaactggaacatggacgacttt
gcggctaacgtaaatttcagctacataggtgagtttgaagacttcaataaaacgcgtact
gttgatgcacagttgttagtggacatgtcgggttcttatcgtttcaacgatacggttaaa
ttaacccttggtgttaataatctgtttgatgaagagccatcatttgctattggcgatggt
gatgctgatttatacggttatgctatgggcgtgcataacccattaggccgttatatttat
actaaagtcacaatgaacttctaa
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