Shewanella denitrificans: Sden_0793
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Entry
Sden_0793 CDS
T00344
Name
(GenBank) Pseudouridine synthase, Rsu
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_0793
Enzymes [BR:
sdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Sden_0793
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sden_0793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
K1-lyase_C
Motif
Other DBs
NCBI-ProteinID:
ABE54083
UniProt:
Q12R43
LinkDB
All DBs
Position
911152..911853
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AA seq
233 aa
AA seq
DB search
MRLDKFVCKSTPLSRTEAVQVIHHERVLVNGVAIVDEAAQVHENNHIILDGKHLVPRPFR
YLLLHKPANCLSANISEPSKSTKYPSVFDVLNIDNSSELHLVGRLDADTTGLLLATDDGR
WSFTITSPNSDCSKVYRVGLAKPLGPEVADKFLAGILLQGEHELTLPAKLEVISPNQVLL
TLTQGKFHQVKRMFAAVGNKVVSLHREKIGAISLDVPQGQWRALTEAEVNAMG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttagataaatttgtctgcaaaagtacccctttgtctcgaacagaggcggttcag
gttattcatcatgaaagagtgctggtcaacggggtggcgatagtcgatgaagcggcgcag
gtgcatgaaaataatcacattattctcgatggtaagcatcttgtccccaggccttttcgc
tacctcttactgcataaacctgccaattgcttaagcgccaatatctctgaacctagcaag
tcgacaaagtacccctcggtgttcgatgtattgaacatagataacagcagtgagctgcat
ttagttggtcgattggatgcggataccacagggctattactcgccaccgatgatggtcgc
tggtcatttactatcacaagtcccaactctgattgcagcaaagtgtaccgggttgggctt
gctaaacccctagggccagaggttgccgataagtttttagcggggatcttattgcaaggg
gaacacgagcttaccttgcccgccaaacttgaagttatttcgcctaaccaagtgttattg
actctgactcagggaaagtttcatcaagtaaaacgtatgtttgccgccgtggggaataag
gtggtgtcgctgcatagagagaaaattggcgctatcagtttggatgtgccccaagggcag
tggcgcgcactaacagaggctgaagttaacgccatgggctaa
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