Shewanella denitrificans: Sden_0815
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Entry
Sden_0815 CDS
T00344
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_0815
Enzymes [BR:
sdn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Sden_0815
Transfer RNA biogenesis [BR:
sdn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Sden_0815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Amdase
Motif
Other DBs
NCBI-ProteinID:
ABE54104
UniProt:
Q12R22
LinkDB
All DBs
Position
complement(933919..935343)
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AA seq
474 aa
AA seq
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MSKKLHIKTWGCQMNEYDSSKMADLLDEYQGYTLTDDATEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIDQVQR
GEKVVIDVSFPEIEKFDRLPEPRADGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPQDD
IILEIAQLAEQGVREVNLLGQNVNAYRGATHDDQICTFAELLRLVASIDGIDRIRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTQMKRGHMAIEYKSIIRRLRKAREGI
QISSDFIIGFPGESAEDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVSDEEKKQ
RLAILQDRITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTENNRVVNFEAPHTHIG
SFVDVEIVDVYTNSLRGIFIRGEAEMDLRRSLRPADILAKHKQDDVLGVTQFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaactacatattaaaacctggggctgccaaatgaatgagtatgactcatcc
aaaatggcggatttgttagacgaatatcaaggctacaccttgaccgacgatgcaacagaa
gcagacgtattgctgctgaacacttgctcgatccgcgaaaaggcgcaagagaaggtattc
caccagcttggtcgctggaaaacattgaaagataaaaagccaggtttaatcattggtgtc
ggtggctgtgtggcgtctcaagaaggcaaagccattaaagaccgtgcccaatgcgtagat
atcatctttggcccgcaaaccttgcaccgtttgcctgaaatgatagatcaagtccagcgc
ggcgaaaaagtcgttatcgatgtgagcttccctgaaatcgagaagttcgatcgcctgcca
gagccacgcgccgacggcccaactgcgtttgtgtctattatggaaggctgtagcaaatac
tgctcattctgtgtagtgccatatacccgcggtgaagaagtcagccgtcctcaggatgat
attattcttgaaatcgctcaacttgccgagcaaggcgtgcgtgaagtgaacctattaggt
caaaacgtcaacgcctaccgcggtgcaacccatgacgaccaaatctgtactttcgccgag
ttattgcgtctggttgccagcattgacggtatcgaccgcattcgtttcaccaccagtcac
ccgattgaatttacccaagacattatcgatgtctacgaagacacccctgaattggtgagc
ttcctgcatttaccggttcaatcaggctcagacagaattctgactcagatgaaacgtggc
cacatggctatcgaatataaatcgattatccgtcgtctgcgtaaggcccgcgaaggcatt
caaatcagctctgattttatcatcggcttcccaggtgaaagcgctgaagacttcgccgac
accatgaaactgattgaagatgtggcctttgatcacagctttagctttatctattcggca
cgcccaggcacaccagctgcggatctgcccgatgatgtcagcgatgaagagaaaaagcag
cgcctggccatcttgcaagaccgcatcactcaacaagccatgcgctacagccgccagatg
ttaggcacagtgcagcgtattctggttgaaggcccctcggttaaaaacccaatggagcta
cgcggtcgcacagaaaacaaccgtgtggtgaattttgaagcgccgcacactcacatcggc
agttttgttgatgtggaaattgtcgacgtatacaccaactcacttcggggtatctttatc
cgtggtgaagctgagatggatttacgtcgcagtttacgtccagcggatatcttggctaaa
cataagcaagatgatgtgttaggcgtcacccagtttaccccatag
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