Shewanella denitrificans: Sden_0860
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Entry
Sden_0860 CDS
T00344
Name
(GenBank) ABC transporter related
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
sdn
Shewanella denitrificans
Pathway
sdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sden_0860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_0860
Transporters [BR:
sdn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Sden_0860
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
RsgA_GTPase
MobB
AAA_29
AAA_24
AAA_16
FtsK_SpoIIIE
S_4TM
MMR_HSR1
DUF87
AAA_33
Dynamin_N
Septin
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ABE54148
UniProt:
Q12QX8
LinkDB
All DBs
Position
complement(983719..985560)
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AA seq
613 aa
AA seq
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MDKSLEKSLTLWLKQQQAACSGYLKLTVLFGVFTGLCLLAQAYLLAKVLDGLIMQNMQIT
RFYPEIASLLLLTSFRALLAYARERSGFIAGQRLRAQVRQTVLNKLVALGPSFIKTKPAG
TWANIVFEQIEDLQDFYAKYLPAILLAGFTPLIILAAIVPVNWLSAIILLVTAPLIPLFM
VLVGMGAAEANRKNFSALQQLNGHFLDSLRGLRTLILFHRQQDEIANIASVSNDVKQRTL
SVLSLAFLSSAVLEFFAAISIAILAVYFGFSYLGHLDWGNFSLLPSSEQQLSLFSGLFVL
LLAPEFYQPLKDLGSHYHAKAKAIAAAESLVALLSIQETALPLKGVPVQQDSSTSLAKIE
FTTWELEANNLTVLSHEGQCLLGPLDFSISGLKKLAVVGASGSGKTTLVNLLLGFLPYEG
SLKIQGIEFNQLDLTDWRQKLAWLGQEPQLFHGTLMENLSLGDKALTPEKAWELLRKANI
DQFVAAHPQGLDLTIGEQAIGISVGQAQRFALARALNHDAQVFMLDEPTASLDISSAEAI
SQSIAKETASKCLLLVTHKLSQLQNMDTILVLEKGRLASRGTYDELMAEQGLFYQLNLEA
SYDINLQTSIGLS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcgttagagaagtcattaaccctgtggcttaagcagcaacaggctgcctgc
tctgggtaccttaaactcacagtcttatttggcgttttcaccggcctttgtctgcttgca
caagcctatctactggccaaggtgctagatggccttatcatgcaaaacatgcaaataacc
cgcttttaccctgaaattgcaagcttactgctactgacgtcatttcgggccttactcgcc
tatgcaagggagcgttctggtttcatagcgggtcaacgccttagggctcaagtgcgccaa
actgtgctcaataaacttgtcgccttaggcccaagctttatcaagacaaaacccgctggt
acctgggcgaatatcgtgtttgaacaaatcgaagatctgcaggatttttatgctaaatac
ctgcctgccatcttattagccgggtttactccgttaattattcttgcagccatagtgccg
gtcaactggctaagtgccatcatcttattggtcacagcccccttaatcccgctttttatg
gtgctggtcggcatgggcgccgccgaagctaatcgtaaaaatttctcagcgctgcaacaa
ttaaacggccatttcctcgacagcttaagaggccttagaaccttaattctgtttcatcgc
cagcaagatgaaatagccaatattgccagtgtctctaatgacgttaagcaacgcacccta
tctgtgcttagccttgccttcttgagctcagccgtacttgaatttttcgctgccatctcc
atcgccatcttggcggtgtattttggttttagctacttgggccatttagattggggaaat
tttagcctgcttccatcgagtgagcagcagttaagtttatttagcggcttattcgtatta
ctgctggctcctgagttttatcagccacttaaagatcttggcagccattaccatgccaag
gccaaagcgattgccgcagcagaaagcctggtcgccttgcttagtattcaagaaactgcc
cttcctcttaagggtgtcccagtgcaacaagattcgagtacatcacttgccaagattgag
ttcaccacttgggagcttgaggctaataacctaacggtgttaagccacgaaggtcaatgc
ctattagggccacttgacttcagcattagcggccttaaaaaactggctgtcgtcggggct
agcggctcaggtaaaaccaccttagtaaacttactattgggctttttaccctatgaagga
tcactcaaaatccaaggtattgaatttaaccagctagatttaaccgattggcggcaaaag
cttgcctggcttgggcaggagccacaattgtttcacggcaccttaatggaaaacttaagc
cttggggacaaagcgctaaccccagagaaagcttgggaattactaagaaaagccaatatt
gatcaatttgtcgcagcccacccacaaggacttgatttaaccataggcgaacaagccatt
ggtatttcagtgggccaagcccagcggttcgctctggctagagccttaaaccatgatgca
caggtatttatgttagatgaacccactgccagcttagatatctccagcgcggaggcgata
tcccaaagcattgccaaagaaactgcgtcaaagtgtttgttactggtgactcacaaactc
agtcaattacaaaatatggataccatactcgtgcttgagaaaggccgcttagccagtcgc
gggacatatgatgagttgatggccgaacagggattattttatcagctcaatttagaggcc
agctatgacatcaacttacagacaagcatagggctaagttaa
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