Shewanella denitrificans: Sden_1035
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Entry
Sden_1035 CDS
T00344
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdn03400
]
Sden_1035
DNA repair and recombination proteins [BR:
sdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sden_1035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Lon_C
DnaB_C
Zn_ribbon_LapB
AAA_22
DUF7125
GvpD_P-loop
SLFN-g3_helicase
AAA
NTPase_1
AAA_16
ABC_tran
AAA_14
AAA_24
nSTAND_NTPase5
KdpD
AAA_33
Viral_helicase1
AAA_29
cobW
AAA_11
Zeta_toxin
nSTAND3
DUF6549
Motif
Other DBs
NCBI-ProteinID:
ABE54323
UniProt:
Q12QF3
LinkDB
All DBs
Position
1186261..1187637
Genome browser
AA seq
458 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCNTCQAWNCITEVRLGTGTSATRTHQFAGYAGAAGSG
TAKVQTLDKIDLNAQPRIASSFAELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCQL
AQVMPALYVTGEESLQQVAMRAHRLGLPTANLNMLSETSVEAICDIALQEKPKVIVIDSI
QVMHMSDVQSSPGSVSQVRESASYLTRFAKQQGIAIIMVGHVTKDGSLAGPKVLEHCIDC
SVMFEGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEAASGSL
VMVVWEGTRPLLVELQVLVDSSAMANPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVF
VNVVGGVKVSETSADLTLLLAMVSSFRGEILPRDLVVFGEVGLSGEIRPVPNGQERLIEA
AKHGFTRAIVPKANVPKKSPPGMQVIGVSKLSQALEVL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataagacggcctatgtgtgtaatgaatgtggccaagatttccctcgctgg
caagggcagtgcaacacttgccaagcttggaactgtattaccgaagtgcgtttaggcaca
ggcacaagtgcaacccgtacccatcagtttgccggttacgcaggtgcggcggggagtggg
actgccaaagtgcagaccctagataaaattgatttaaatgcacaaccacgaatagccagc
tcctttgccgaactggatagagtgctaggcggcgggatagtgcctggcagcgccattttg
attggcggccatcctggggcgggtaaaagtaccttattgctgcaaaccttgtgtcaactg
gctcaagtgatgcctgcgctttatgtcactggagaagagtcgttgcaacaagtcgcaatg
cgggctcacaggttaggattgcctacggcaaatttgaacatgctatctgagaccagtgtt
gaggctatttgcgatatcgccctgcaagaaaagcccaaagttatagtgatagactccatt
caagtgatgcacatgagcgatgtgcaatcttcccctggcagtgtgtctcaggtgcgtgag
tcggcttcttatttaacccgttttgcgaaacagcaaggcatagccatcatcatggtgggc
catgtgaccaaagacggtagcctagctggccctaaagtgttggaacactgcatagactgc
tctgtgatgtttgaaggggatagtgatagccgttatcgcacgttgcgctcccataaaaac
cgttttggcgccatcaatgagcttggggtgtttgccatgacggagcgaggccttaaagaa
gtggccaatccatcggcgatttttctgtctcgcggcgaagaggcggcctcgggttcttta
gtcatggtggtatgggaaggcacccggcccttgctggtggaattacaggttttagtagac
agctcggccatggcgaacccaaggcgagtggctgtgggtatggatgctaatcgcctcgcc
atgttactggctgtgatgcacagacacggcgggctacagatgtccgatcaagatgtgttc
gttaacgtggtcggcggggttaaggtctctgagacgagcgccgacttaaccttattgctg
gccatggtatcaagttttcgtggtgagattttaccccgtgatttagtggtgtttggtgag
gtgggcttatctggcgaaatacggccagtgcctaatggacaagaaagactcattgaagcg
gctaaacacgggtttacccgcgccatagtccctaaagccaatgtccctaagaagtcaccg
cctggcatgcaggtcattggagtgagtaaattatcccaagccttagaagtgctttaa
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