Shewanella denitrificans: Sden_1116
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Entry
Sden_1116 CDS
T00344
Name
(GenBank) ABC transporter related
KO
K02013
iron complex transport system ATP-binding protein [EC:7.2.2.-]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_1116
Transporters [BR:
sdn02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron complex transporter
Sden_1116
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
nSTAND1
AAA_16
AAA_23
RsgA_GTPase
SbcC_Walker_B
AAA_22
AAA_29
AAA_30
AAA_27
DUF2813
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ABE54404
UniProt:
Q12Q72
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All DBs
Position
1284405..1285328
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AA seq
307 aa
AA seq
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MNHGEVLAENSQTGLLKDKVLRVSDLSWQAGHKQVLDKLSFNLEAGTMLGLIGPNGAGKS
SLLRCLYRFIKASDGQIELFGRDLGQYSSRELAKLIAVVQQEAQGSAEFAMSTVQVVSLG
LTPHKGLFDGLTSEDKQRVDQALAKVGLETQAEQAFSQLSGGEKQRALIARAIVQQPKLL
ILDEPTNHLDIRYQIQILELVKSLGISVMASIHDLNLASALCDKLLLIHQGRLVAQGRPD
EVLTPARISEVFGVCCDIRPHPQHGQPLISYFYGYNASAHALSTATAHLIGAERAAKRAG
GFDGAEQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatggcgaagtattagctgagaatagccaaactggcttattgaaagataaggtc
ttaagggtatccgatctcagttggcaggcagggcacaagcaggtgctggataaactgagt
ttcaacttagaggcaggcaccatgctggggctcataggccccaatggcgcagggaaatcc
agcttattacgctgcctttatcggtttattaaggcaagtgatggccaaattgagctgttt
ggccgtgatctcggccagtattcctctcgcgagcttgccaagttgattgccgtggtgcag
caagaagcccaaggctcggctgagtttgccatgagcacagtgcaggttgtaagccttggg
ctcacgccccacaaaggcttgtttgatggcttaacttctgaggataaacagcgggtagat
caagccttagctaaggtcgggcttgagacgcaggcagagcaagcctttagccaattgtca
gggggggagaagcagcgcgccttgatagccagagccatagtgcagcagcccaaactgctt
atcttggatgaacccaccaatcatttagacatacgttatcaaattcaaattcttgaacta
gtcaaaagcttaggtataagcgtcatggcctccatccatgatttaaatcttgccagcgcc
ctgtgcgacaaactgctgcttattcatcaaggccgcttggtggctcaaggtcgtcctgat
gaggtgctgactcccgcgcgcataagtgaagtgtttggggtctgctgcgatattcgccct
catcctcagcatggtcagcctttgatcagttacttttatggctacaatgccagtgctcat
gccttatccactgcgacggcccatctaatcggtgcggaaagggctgcgaaaagagctggt
ggttttgatggagcagagcaatga
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