Shewanella denitrificans: Sden_1168
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Entry
Sden_1168 CDS
T00344
Name
(GenBank) Radical SAM
Organism
sdn
Shewanella denitrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
B12-binding
Imm51
Motif
Other DBs
NCBI-ProteinID:
ABE54454
UniProt:
Q12Q22
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Position
1343878..1345578
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AA seq
566 aa
AA seq
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MKEQNNDTIPIRILQQTALEINVPQNSSLREYLGTKDETSRTPCARKPPKYEVYNQGYSA
PPKVLLVLPPMCMYEGAVKRLIPPLGLCYIAANMLKHGYEVDILDCIAEGYETETLIAPN
IYRLGITEEEFAERIESSDHDVICFSMIYSSDIENLYRYAKIVKQVAKDKVVMAGGMHAS
IYPEQFIRDAGQWDDQPVIDFVIRGEGEFRLIHFIENLQQGRFDIHADGLVGWHDGDVFI
NPQYTQIQDLNDLPFPAYHKLPLEKYFHHNVPFSPYPRGNRVMQIYTSRGCPIGCTFCSS
TNFNKAYRSRSVENVIEEIKFYQREYGIDEIQFADDNLTFDKKRSIKLFNELEKLNIQWC
TPNGIMINTLDEQVLDAMIRSGLYQITLSLDSGNADTLREKHRKPVKLQRVPVLMDYLKK
RGVLMHGTLVVGMPGETVEDIEKGFRYVETLPFNSMNVFIAQALPGSELFEVSLQNGAIT
YETSLYIDTAQSTLKLTDIDGKVLEALVENFLSAYNRKIYQRDTETWNKKYQDHQKRMAK
ICIGKASANTSAIIEASNESKESEWA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacaaaataacgataccattcctatcagaatactccagcaaactgcgcttgaa
attaatgtacctcagaacagctcgcttagagaatatttaggcacaaaagatgaaacctcc
agaacaccctgtgctcggaaaccacctaaatatgaagtttacaatcaaggttattctgcg
ccacctaaagtgttactggtattgcctcctatgtgtatgtatgaaggcgcagttaagcga
ctcattccgcctttaggtctttgctatatcgctgccaatatgctcaaacatggctatgaa
gttgatattctggactgcattgctgaaggttatgaaacagaaacattaattgcacctaat
atttaccgtctgggcattaccgaggaggaattcgctgaacgtattgaaagtagcgatcat
gatgtaatttgtttttcgatgatatattcatctgatatagagaatctgtaccgctacgca
aaaattgttaagcaggtggcaaaggacaaagtggtcatggctggaggaatgcatgcctct
atttatccggaacaattcattcgggatgcaggacaatgggatgatcaaccagttattgat
tttgttattcgtggagaaggtgaatttcgtctcattcactttattgaaaaccttcaacag
ggaaggttcgatatccatgctgacggactagtaggctggcatgatggggacgtttttatt
aatcctcagtatacccagattcaagatctgaatgacctgccttttcctgcatatcataag
cttccactggaaaaatattttcatcacaacgtaccattttcaccttaccctcgcggtaat
cgggttatgcaaatatatacctctcgtggctgtcctattggctgtactttttgttcaagt
acaaacttcaataaagcctatcggagtcgaagtgttgaaaatgttatagaggaaatcaaa
ttctatcagcgtgaatacggcattgatgagattcagtttgcagatgacaatttaaccttt
gataagaagcgatcaattaaactttttaatgagctcgaaaaactcaatattcagtggtgt
actccaaacggaattatgataaacacccttgatgaacaagtacttgatgccatgattcgt
tcgggtctttatcaaataaccctctcactggatagtgggaatgccgatactttgagagaa
aaacaccgcaagccagtaaaactccaacgtgtgccagtcttgatggattatttgaaaaaa
cgaggggtactcatgcacgggactctggtggtcggaatgccgggggaaacggtagaggat
atcgagaaggggttccgttatgtggagacattaccatttaattcaatgaatgtttttatt
gctcaggctcttcccggttcagagctgtttgaggtgtcattacaaaacggcgctatcacc
tatgaaacttcactctatattgatactgcgcaatcgacattaaagctaacagatattgat
ggaaaagtgttggaagcgttagtggaaaattttcttagtgcctacaatcgaaaaatatat
caacgggatactgagacctggaataaaaagtatcaggatcaccaaaaacgaatggcaaag
atctgcataggaaaagcatctgccaatacttcagccattattgaggcatcaaatgaatca
aaagaaagtgaatgggcttag
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