Shewanella denitrificans: Sden_1245
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Entry
Sden_1245 CDS
T00344
Name
(GenBank) Malate synthase A
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00620
Pyruvate metabolism
sdn00630
Glyoxylate and dicarboxylate metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
Module
sdn_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Sden_1245
00630 Glyoxylate and dicarboxylate metabolism
Sden_1245
Enzymes [BR:
sdn01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
Sden_1245
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
ABE54531
UniProt:
Q12PU5
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All DBs
Position
1454531..1456198
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AA seq
555 aa
AA seq
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MTAEQLVAKYTQGEAKSLSSQQAETDPSPLAIIGPDVQGQEELFTPGALALLTALSENFA
GEVTELLAKRSQKQARIDKGELPDFLPETRAIRDGQWSIRGIPADLTDRRVEITGPVDRK
MIINALNAKVKVFMADFEDSLAPSWQKVIEGQINLRDAVRGDISFTAPDTGKQYSLDPDP
AVLICRVRGLHLKEKHVEYQSNAIPGALFDFALYFYHNYHQLLAKGSGPYFYLPKLESHL
EARWWAKVFAFVEDRFCLKPGTIKCTCLIETLPAVFEMDEILYELRSNIVALNCGRWDYI
FSYIKTLKNHADKVLPDRQAVTMDTKFLSAYSRLLIKTCHKRDALAMGGMAAFIPAKDEA
TNAQVLQKVRGDKELEARNGHDGTWVAHPGLADTAMEIFNRYIGPGETNQLHITRDVDAP
ISASELLSPCDGERTETGMRLNIRIAVQYIEAWIQGNGCVPIYGLMEDAATAEISRTSIW
QWIKHGKSLSNGKLVTKELFNSMLKEELVTVKQELGSERFNSGQFAKAAELFTSITTADE
LVDFLTLPGYELLTA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagaacaactggttgcaaaatacactcagggcgaggctaagagcttatcgtct
cagcaagctgaaacagacccttcgcctttggcgattatagggccagatgttcaaggtcaa
gaagaactctttacaccgggtgcgttagccttattaaccgccttaagcgagaactttgct
ggcgaggtgactgagctgctggctaagcgatctcagaaacaggcacgaatagataaaggc
gaattgcctgattttttaccagaaacccgtgccattagagatggacaatggtcaattaga
ggtattccggcagatctcaccgatcgtagggtagaaatcacaggtcctgttgaccgtaag
atgatcatcaatgccctcaatgccaaggtcaaagtattcatggctgattttgaagactca
ttggcaccgagttggcagaaagttatcgaaggtcaaattaacctgcgtgatgctgtgcgg
ggggatatcagttttaccgcccctgatacgggcaagcaatacagcttagatcctgatcca
gccgtgcttatttgccgagttcgaggcctgcacttaaaagagaaacacgttgaatatcaa
agcaacgcaatccccggtgctttattcgatttcgcgctgtacttttatcataactaccat
caattattggctaaaggttcaggcccgtatttttatcttccaaaacttgaaagccattta
gaagcgcgctggtgggcaaaagtcttcgcgtttgtcgaagacagattctgtctaaagcct
ggcaccattaaatgcacttgcttgattgaaactttacctgccgtgtttgaaatggatgaa
attctttatgaattacgttcaaacatagtggcgctaaattgcggccgctgggattatatt
ttcagttatatcaaaacgttaaaaaaccatgctgacaaggtcttaccagaccgtcaagcc
gtaaccatggataccaaattcctaagtgcttactcacgcttactgatcaagacctgccat
aaacgcgacgccttagccatgggcggtatggctgcctttattcctgcaaaagatgaagcg
accaatgcacaagtgttacaaaaagtgcgcggcgataaagagcttgaagcgcgtaatggc
catgatggcacttgggttgcccatccgggacttgcggatactgcgatggaaatcttcaat
cgatacataggtccaggtgagaccaatcagctgcatatcacccgtgatgtcgatgcgcca
atatcggccagtgaattactcagcccttgcgatggcgaacgtactgaaacgggtatgcga
cttaatattcgtatcgcagtgcaatatatcgaagcttggatccaaggaaacggctgcgtg
cctatctacggcttgatggaagatgctgcaacagctgaaatttctcgaacgtccatctgg
caatggattaagcacggtaaaagcctttccaacggcaagttagtgaccaaagaattgttc
aacagcatgcttaaagaagaattagtcacagtaaaacaagaattgggcagtgaacggttt
aatagtggccaatttgccaaagccgctgagctattcaccagtattaccacggccgatgag
ctagttgatttcttaaccttaccgggttacgagctgttaacagcttaa
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