Shewanella denitrificans: Sden_1246
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Entry
Sden_1246 CDS
T00344
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00630
Glyoxylate and dicarboxylate metabolism
sdn00640
Propanoate metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
Module
sdn_M00012
Glyoxylate cycle
sdn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sden_1246
00640 Propanoate metabolism
Sden_1246
Enzymes [BR:
sdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Sden_1246
4.1.3.30 methylisocitrate lyase
Sden_1246
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Gene cluster
GFIT
Motif
Pfam:
ICL
PEP_mutase
Androglobin_IV
Motif
Other DBs
NCBI-ProteinID:
ABE54532
UniProt:
Q12PU4
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Position
1456275..1457600
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AA seq
441 aa
AA seq
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MSKVEAGLTRQQQIDAIKKDWAENPRWKHVKRPFTAEEVVALRGSIVPENTIAKRGAAKL
WELVNGGAKKGYVNSLGALTGGQAVQQAKAGIEAIYLSGWQVAADANLAGTMYPDQSLYP
ANSVPAVVSRINNSFRRADQIQWGKEINPGDKNYTDYFLPIVADAEAGFGGVLNAFELMK
SMIDAGAAGVHFEDQLASVKKCGHMGGKVLVPTQEAVQKLVAARLAADVSGVDTLVIART
DANAADLMTSDCDAYDRDFVTGERTSEGFYRVKAGLDQAISRGLAYAPYADLIWCETAKP
CLEEAKKFAEAIHAQYPDQLLAYNCSPSFNWKKNLDDATIAKFQQELSNMGYKYQFITLA
GIHNMWYNMFDLAYDYARGEGMKHYVEKVQEVEFAAAEKGYTFVSHQQEVGTGYFDQVTT
CIQGGKSSVTALTGSTEEEQF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggtagaagcagggttaactcgtcagcagcagatcgatgcgattaaaaaagat
tgggctgagaatccacgttggaagcatgtgaagcgtccatttacggctgaagaagtggtt
gcactacgtggatctatcgtgccagaaaacaccatagctaaacgtggcgcggctaaatta
tgggagctggtgaatggcggagctaaaaaaggctatgtgaactcactaggtgcattgact
ggcggccaagccgtgcagcaagccaaagccggtatcgaagcgatttacctttcaggttgg
caggttgccgctgacgctaacttagcgggcaccatgtatccagaccaatctttgtatcct
gcaaactcagttccagccgtggtgagccgtattaacaactcattccgccgtgctgaccaa
attcaatggggcaaagaaattaatcctggtgataaaaattataccgactacttcctacca
atcgttgccgatgcagaagcgggttttggcggcgtactcaatgccttcgaactgatgaag
tctatgatcgatgcgggcgctgctggggttcactttgaagaccaattagcatcagtgaag
aaatgtggccacatgggcggcaaggtactagtaccgactcaagaagcggtgcaaaagcta
gtagcggcgcgtctagcggccgatgtaagcggcgttgatacgctagttatcgctcgtacc
gatgctaatgctgctgatttgatgacttcagattgtgatgcatatgaccgtgactttgtt
acaggcgagcgtaccagtgaaggtttctaccgcgttaaagcggggcttgaccaagcgatt
tctcgcggtcttgcctatgcgccatacgcagatttaatctggtgtgaaaccgctaagcct
tgccttgaagaagcgaagaaatttgctgaagcgattcacgcacagtacccagatcaattg
ctggcttataactgttcaccttcgtttaactggaagaagaacttggatgacgcaacaatt
gcaaaattccaacaagagctatcaaacatgggttacaagtaccaattcatcaccttagct
ggcattcataacatgtggtacaacatgttcgatttagcctatgactatgctcgcggtgaa
ggcatgaagcactatgttgagaaagttcaggaagttgaatttgctgctgcagagaaaggt
tatacctttgtgtctcaccagcaagaagtgggcacaggctacttcgaccaagtgacgacc
tgtatccaaggtggtaagtcttcagtaacggcactaacgggttcaactgaagaagaacag
ttttaa
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