Shewanella denitrificans: Sden_1253
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Entry
Sden_1253 CDS
T00344
Name
(GenBank) conserved hypothetical protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_1253
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Sden_1253
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sden_1253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
ABE54539
UniProt:
Q12PT7
LinkDB
All DBs
Position
1463729..1464850
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AA seq
373 aa
AA seq
DB search
MSEKKINLLDLDRKGLRALFTEMGEKPFRADQLMKWIYHFGVSDFEEMTNINKVLRSKLA
ERCVIVAPEIASFQKSADGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECTF
CSTGQQGFNRNLTVSEIVGQIWRVAQFLGFVKTTGERPITNVVMMGMGEPLLNLKNVIPA
MDIMLDDFGFSLSKRRVTLSTSGVVPALDILGDSIDVALAVSIHAPNDELRDILVPVNKK
YPLAEFLGGIRRYIAKSNANRGRVTVEYVMLDHINDSTEQAHELAKLMKDTPCKVNLIPF
NPYPGSPYGRSSNSRIDRFSKVLMEYGFTVIVRKTRGDDIDAACGQLAGDIRDRTKRLAK
KRMQENQISVTMD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaaaaaatcaatttattagatcttgatcgtaaaggtttacgggctttattt
accgaaatgggggaaaaaccctttcgtgcagatcagctaatgaaatggatttatcatttt
ggtgtcagtgatttcgaggaaatgaccaacatcaataaagtattacgctcaaaactggcc
gagcgctgcgttattgtggcgccggagatcgcaagcttccaaaaatctgccgatggcacc
attaaatttgccatcaatgtgggccaaggccaagaagtcgaaaccgtgtatattccagaa
gatgacagagccaccttatgtgtgtcttctcaggttggctgtgccttggagtgtactttc
tgttcaaccggccagcaaggctttaaccgtaacttaaccgtgtcggaaatcgtcggtcaa
atttggcgagtggctcaattcttaggctttgttaaaaccacaggcgagcgtcctatcact
aacgtggtgatgatgggcatgggtgaacccttgcttaacctgaaaaacgtgatccctgcg
atggatatcatgttagatgatttcggctttagcttgtctaagcgccgagtgaccctatcg
acttcgggtgtagtacctgcattggatattttaggtgattctatcgatgtggccttagct
gtgagcattcatgcgcccaatgatgagctgcgtgacatacttgtgccagtgaataagaag
taccctttggcggaattcttagggggtattcgtcgttatattgctaagtctaatgccaat
cgcggccgtgtaactgtggaatatgtgatgcttgatcacatcaacgacagtacagagcaa
gcccatgaactggctaaattaatgaaagacactccttgtaaggttaatttaatcccgttt
aacccatacccaggttcgccttatggtcgctcgtctaattctcgcatcgacagattttca
aaagtgctgatggaatacggcttcactgtcatagtgcgtaagactcgtggtgatgatatc
gatgccgcttgtgggcagcttgctggcgacattcgtgacagaactaagcgtttagcaaaa
aaacgcatgcaagagaaccaaatatcggtcacaatggattaa
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integrated database retrieval system
