Shewanella denitrificans: Sden_1306
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Entry
Sden_1306 CDS
T00344
Name
(GenBank) protein of unknown function DUF1078-like protein
KO
K02390
flagellar hook protein FlgE
Organism
sdn
Shewanella denitrificans
Pathway
sdn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sden_1306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sdn02035
]
Sden_1306
Bacterial motility proteins [BR:
sdn02035
]
Flagellar system
Flagellar assembly proteins
Rod and hook
Sden_1306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FlgE_D2
Flg_bbr_C
LlgE_F_G_D1
Flg_bb_rod
Motif
Other DBs
NCBI-ProteinID:
ABE54592
UniProt:
Q12PN4
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Position
1525388..1526755
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AA seq
455 aa
AA seq
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MSFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYANSIFSNGKTAVGGGVT
TTQVAQQFSQGSLQFTSNALDLAISGGGFFVTSANIDTSQDQSFSRAGAFKVDSNNYMVD
SAGNFLQAFPVDETGSSTSVSLTTTKPVKIPDTAGSPVKTSSIGMQMNLNSGDKVLDPAA
FDPTDSKTFNKLTSVTMFDSLGESHVMTSYFVKPTNGSYTGESNWVVFYAVDGKQVDLAG
TDVGTYQTDTDGDRIADTPQLAQTAGGWRGSVLKFNDVGAYTGSDPAVLTTEALGLPGAG
ILGPGADGTQTLSIAFNNPTQYSSNFEVTELTQNGTTVGRLTNVSIGSDGLVIAKYSNGS
TVPLARVALVRFANEQGLTQVGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDL
TTELVDLISAQRNFQANSRTLEVNNTLQQTILQIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaacattgcactcagtggcattgctgccgcgcagaaagacttaaatacaaca
gcaaataatattgcgaacgttaacactatcggttttaaagagtcgcgagcagaatttgct
gacgtttatgctaattctattttctctaatggtaagacagcagtgggtggcggggtaacc
acgacccaagtggcgcagcaattctctcaaggcagcctgcaatttaccagtaatgcatta
gatttggcgattagtggtggtggcttttttgtcacttctgccaatatcgatacctctcaa
gatcaatctttttcacgagctggtgcatttaaagttgattcaaataattacatggtggac
tcggcaggtaattttttgcaagcattcccagtggatgaaactggtagctcaacctcagtg
agcttaacaaccaccaaacctgtgaaaatacctgatactgcaggtagtccggtaaaaaca
agctctattggcatgcagatgaatttaaactcaggtgacaaggtgttagatccagcagca
ttcgatccaacagattctaaaacattcaataagttaacgtctgtaactatgtttgattca
ttaggtgaatctcatgttatgaccagctactttgtgaaacccaccaatggctcatataca
ggtgaaagtaactgggttgtcttctatgctgtagatggtaaacaggttgaccttgctggg
actgatgttggtacctatcagacagataccgatggcgatcgtatcgctgatacgccacag
ctcgctcaaacggctggtggctggcgtggatctgtgcttaagtttaatgatgtaggcgcc
tatactggcagcgatccagcagtactaaccactgaggccttagggttacctggcgcaggt
attttaggcccaggcgccgatggtacccaaacactgagtatcgcgtttaataaccccact
caatactcatcaaactttgaagtgacagagcttacccaaaacggcactacagttggccgc
ttaactaacgtctccattggctccgatggactggtgatcgctaagtacagtaacggctct
acagtgccactagctcgagtagccttagtgcgttttgccaacgagcaagggttgactcag
gtgggaaatacctcttggaaagccagcttagattcaggcccggcgcttgcgggtgaagct
aatagcggcacatttggtagcattcgttcatcagctttagagcagtcgaatgttgatttg
accacagagcttgtagatttaatctctgctcagcgtaactttcaggcgaactcgagaacc
ttagaagtgaataataccttgcagcaaaccatactgcagatccgctaa
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