Shewanella denitrificans: Sden_1322
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Entry
Sden_1322 CDS
T00344
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
sdn
Shewanella denitrificans
Pathway
sdn02020
Two-component system
sdn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sden_1322
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sden_1322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sdn02022
]
Sden_1322
02035 Bacterial motility proteins [BR:
sdn02035
]
Sden_1322
Two-component system [BR:
sdn02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Sden_1322
Bacterial motility proteins [BR:
sdn02035
]
Flagellar system
Flagellar assembly proteins
Others
Sden_1322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
Mg_chelatase
AAA_16
HTH_24
AAA_19
AAA
MerR
HTH_Tnp_ISL3
FleQ
AAA_14
AAA_3
HTH_20
MCM
DUF2089
HTH_23
TIP49
HTH_11
AAA_18
nSTAND3
OKR_DC_1_N
AAA_7
HTH_Mga
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABE54608
UniProt:
Q12PL8
LinkDB
All DBs
Position
1542862..1544202
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AA seq
446 aa
AA seq
DB search
MSEAKLLLVEDDHALREALLDTLQLAHYDCVDVASAEEAIMALKQTSFDMVISDVQMEGV
GGIGLLKYLQQSHPKLPVLLMTAYATIDSAVNAMKLGAVDYLAKPFAPEVLLNQVSRYLP
LKHDSQQPVVADEKSHALLALAQRVAISDASVMIMGPSGSGKEVLARYIHQHSSRSDEPF
VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMELGLQAKL
LRVLQEKEVERLGGRKTIKLNVRVLATSNRDLKAMASSGAFREDLYYRINVFPLVWPALN
QRPADILPLARHLIQKHAPSTAAVPELDENATRRLLAHRWPGNVRELDNVIQRAMILHCG
DKIGLDDIILDSGDMCLSSDANMALKTVEVEGLGDELKAQEHVIILETLTQCNGSRKDVA
ERLGISARTLRYKMAKMRDMGIELPA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagctaaattattattggtagaagatgatcatgccctgcgagaagcgctatta
gataccttgcagttggcacattacgattgcgttgatgtcgcctctgcagaagaggccatc
atggcactcaagcaaacctcatttgatatggtgataagtgatgtgcaaatggagggggta
ggcgggataggcttgcttaaatatttgcagcagtctcaccccaaactacctgtgctatta
atgacagcctatgccaccatagatagcgccgttaatgcgatgaaactgggtgctgtggat
tatttagccaaaccttttgcacctgaagtattgcttaatcaagtctctcgttatttgcca
ttaaagcatgatagccagcagccagtggttgccgatgaaaaaagtcatgccttgttagcc
ttggcacagcgggtggcgatatcggatgcgtcagtgatgataatgggccccagtggttca
ggaaaagaagtgcttgcccgatacattcaccagcatagttcccgtagtgatgagccgttt
gtggccataaactgcgcagccattccagagaacatgttagaggcaaccttgtttggctat
gagaaaggggcctttactggcgcttaccaggcttgtcctggtaagttcgagcaagcccaa
ggcggtaccttgttgttggatgaaatttctgaaatggaattaggcctgcaggctaaatta
ttgcgagtcttgcaggaaaaagaagttgaacgtttgggcggccgtaagacgataaaactc
aatgtccgagtattggcaacctcgaatcgcgatctaaaagcaatggcatcatccggtgca
ttcagggaggatttatattaccgtattaatgtattcccattagtttggcctgcgcttaat
caaaggcctgcagacatcctacctttagccagacatttgatccaaaagcatgcgcccagc
accgcagctgtgccagagcttgatgaaaacgccactagacgcttgttagcccatagatgg
cctggcaatgtacgcgaattagataatgttattcaacgggcgatgatcctccattgcggc
gataaaattggccttgatgacatcattcttgattcaggggatatgtgcctgagcagtgat
gccaacatggccctaaaaacagtggaagtagaagggttaggcgatgagttaaaagcacaa
gaacacgtgatcattctcgagacgttaactcaatgtaatggtagccgtaaagatgtggct
gaacgcttaggcataagtgctcgcaccttaaggtacaagatggctaaaatgagagacatg
ggcatagagctgccagcttag
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