Shewanella denitrificans: Sden_1414
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Entry
Sden_1414 CDS
T00344
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_1414
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_1414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
DUF2490
Porin_4
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABE54700
UniProt:
Q12PC6
LinkDB
All DBs
Position
complement(1649510..1650841)
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AA seq
443 aa
AA seq
DB search
MPQKQSSAKEVVTHTIEISIIMNKFNKTLLATAITLASTQAMSAGFQLNSQSATGIGRAM
AGDAIIADNASVLSRNPAAMALFDKKALSVGLTFADIDVNVDDVTKTVPGLGTVNFGDVH
GAADSKIIPNFYYINPIDDKFAIGFAAFSNYGTGTDLTPLANAGVNTPVGFMPAPVDLLG
NTEVLTVNFNTSMSYRVNEEFSFGFGIDAIYAEGTLTRKGSVPVANVGVVPVTLVDVDAD
GWAFGAILGMSYEVNADHRFGLSYRFSPTLSAKGDISFNRQDYAKIDIPMADIAQFAGFH
QLTDTFAVHYTAQWTSWSDFDHITVKNNPVQQHLKTYHWQDSWFLSLGATYNISQDLTAR
VGVASDQGVVDQLSSLSIPDSDRHWYTTGLSYQLNEQSSVDLGVAYVRGENVTVKENSAI
LGEITAHTRSNGTYYSVQYNYSF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaagcagtcttcagccaaagaggtcgtcactcacacaatagagataagtata
ataatgaataaatttaacaagacactcctcgctactgccatcacattagccagcactcaa
gcaatgtcagccggctttcagttaaacagtcaatctgccaccggtatcggccgtgctatg
gccggtgacgctatcattgctgacaacgcttcagtactttcacgtaaccctgctgctatg
gcattgtttgacaaaaaagcactatctgtagggttaacctttgctgatatcgacgttaat
gtcgatgatgttaccaagacagttcccggccttgggacagtaaactttggtgatgtgcac
ggcgccgctgacagcaagatcattccaaacttttactacatcaatcctatcgacgacaag
tttgccattggcttcgccgcttttagtaattatggcactggcactgacttaaccccgtta
gccaatgctggcgtcaacacgcctgtaggttttatgcctgctcctgtggatctactgggt
aacactgaagtgcttactgttaatttcaacaccagtatgagctatcgtgttaatgaagaa
ttcagctttggctttggcatagatgccatttacgccgaaggcaccttaacccgtaaaggc
agcgtacctgtggctaatgtgggtgtagtgcctgtgacccttgtggatgttgatgccgat
ggttgggcctttggtgctattttaggtatgagctatgaagttaatgcggatcacagattt
ggtttaagctatcgctttagcccaaccttaagcgcaaaaggtgatatcagttttaatcgt
caagactacgctaagattgatatccctatggctgatattgctcagttcgccggtttccat
cagttgaccgacaccttcgcggtgcactacacggctcagtggactagctggagcgacttt
gaccatatcacagtcaaaaataaccccgttcagcaacacctaaaaacataccactggcag
gattcttggttcttgagcttaggggcaacttataatatcagccaagacttaacggctcgt
gtgggtgtggctagcgatcaaggcgtcgttgatcaattgtcttcattgtctattcctgat
tctgaccgtcactggtacaccactggactgagctatcagttaaatgaacaatcgagtgtc
gacttgggcgtggcttatgtacgcggcgagaatgtcactgtgaaagaaaacagtgcgatc
ttaggcgagattacagcgcacacccgctctaacggtacttactactcagtgcagtacaac
tacagtttctaa
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