Shewanella denitrificans: Sden_1419
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Entry
Sden_1419 CDS
T00344
Name
(GenBank) ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00230
Purine metabolism
sdn00240
Pyrimidine metabolism
sdn01100
Metabolic pathways
sdn01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Sden_1419
00240 Pyrimidine metabolism
Sden_1419
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
Sden_1419
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GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
ABE54705
UniProt:
Q12PC1
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Position
1655508..1657622
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AA seq
704 aa
AA seq
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MLVVIKRDGCRTVFNAERIQEAVIAAMASANKQDVDYACTLAEQVRQQMQGKREVDIHEL
QDAVENLLMAGPYKAVARHYIEYRHDRDLCREAKSKLNQQILGLVEQSDAALLNENANKD
AKVIPTQRDLLAGIVAKHYAKSHLLPKDVVQAHERGELHYHDLDYAPFFPMFNCMLIDLG
GMLTKGFKMGNAEIEPPKSIATATAVTAQIIAQVASHIYGGTTINRIDEVLAEFVTKSYQ
KHLATGIEWQVADAAKYALSLTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
ESKLIQRSMLNVRLEGLGKNRKTPVFPKLVFAIKAGLNHKLGDNHYDIKQLALKCASLRM
YPDILNFDQVVKVTGSFKTPMGCRSFLGAYEANGELIHEGRNNLGVVSLNLPRIAIEAKG
DEAAFYQLLDARLLVAKKALDSRISRLDGVKARVAPILYMEGACGVRLKADDEISSIFKH
GRASISLGFIGLHETIQALFGQEHVFDSAILREKALEIIRYLKQTTDAWKAETGYGFSLY
STPSENLCSRFCELDSSEFGLIKGVTDKGYYTNSFHLDVEKKVNPFDKLDFEMAYPAITN
GGFICYGEYPNMQHNLSALEQVWDYSFSRVPYYGTNTPIDECYDCGFLGEFNCTSKGFVC
PKCGNHEPSRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtagtcataaaaagagatggatgtcgtacagtatttaatgccgagcgtattcaa
gaggccgttatcgcggccatggcatcggcgaacaaacaagatgtggattatgcctgcacc
ttggcagagcaggttaggcaacaaatgcaaggcaagcgagaagtcgacatacacgagctg
caagatgccgttgaaaacttactcatggcgggcccttataaagccgtggcccgccattat
attgaatatcgccatgacagagacttatgccgtgaagccaagagcaagctcaaccagcag
attttaggcttagtagagcaaagtgatgcagcacttttgaatgaaaatgccaataaagat
gccaaagtcatcccaactcaacgtgatttgttagcgggcattgtcgccaagcattatgcc
aaaagccatttattgccaaaagacgtggttcaagctcatgagcgcggtgagctgcattat
cacgacttagattatgcgccgtttttccccatgtttaactgcatgcttatcgacttaggc
ggcatgctcaccaagggctttaagatgggtaatgccgaaattgagccgcctaaatccata
gctacggcgacagccgttacagcgcaaattatcgctcaggttgccagccacatttatggc
ggcaccaccattaaccgtatcgatgaagtattggcagaatttgtcactaagagctaccaa
aaacatttagcgacaggcatagagtggcaagtggcagacgcagcaaagtacgcgctatcc
ctaacagaaaaagagtgtcacgatgcttttcaatcccttgaatatgaagtaaataccttg
cacacggctaacgggcaaaccccgtttgtgacctttggttttggtttaggcacctcttgg
gagtcaaaactcatccaacgctccatgctcaatgtgcgcctcgaaggcctaggtaaaaac
cgcaagacaccggtattcccaaagcttgtgtttgccattaaagcgggactgaatcataag
ctgggtgacaaccactatgacatcaaacagctggcgcttaagtgtgcaagcctgagaatg
tatcccgatattcttaattttgatcaagtggttaaggtcacaggttcctttaaaaccccc
atgggttgccgctcgttccttggcgcctatgaagcaaatggcgagcttatccatgaaggt
cgcaataacttgggggtggtgagtttgaacttaccgcgaatagctattgaggctaaaggt
gatgaagctgccttttatcaattgctagatgctcgtttacttgtcgctaaaaaagcctta
gatagccgcatcagccgtctcgatggtgtaaaagctcgggttgcgccgatcctctatatg
gaaggggcttgtggcgtgcgcttaaaggctgatgatgagataagcagtatctttaaacat
ggtcgcgcatccatttcattaggctttattggcttacatgaaaccattcaggcacttttt
ggccaagaacatgtctttgatagtgctattttgcgagaaaaagcccttgaaattattcgc
tatctaaaacaaacaacagatgcatggaaggcagaaacgggttacggctttagtttatac
agcaccccaagtgagaacctctgcagccgcttttgcgagctcgatagcagtgagtttgga
ctcattaaaggcgtgacagacaaaggctattacaccaatagttttcatttagacgttgag
aagaaagttaaccccttcgataaactggattttgaaatggcctatcccgctatcaccaat
ggcggctttatttgttacggtgaataccccaatatgcagcataacttatcggcactggag
caagtgtgggattacagttttagtcgggtgccctattacggcaccaataccccaattgat
gagtgttatgactgcggctttttaggtgaatttaactgtaccagcaagggctttgtctgc
ccaaaatgcggcaatcatgagcctagccgcgtgagtgtgactcgaagggtctgtggttat
ttaggcagccctgatgcccggccctttaatgcgggtaagcaagaagaagtgaagcgccgc
gtcaagcatttgtga
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