Shewanella denitrificans: Sden_1485
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Entry
Sden_1485 CDS
T00344
Name
(GenBank) AAA ATPase containing von Willebrand factor type A (vWA) domain-like protein
Organism
sdn
Shewanella denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bactofilin
COG3_N
GT87
Motif
Other DBs
NCBI-ProteinID:
ABE54770
UniProt:
Q12P56
LinkDB
All DBs
Position
1718286..1723571
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AA seq
1761 aa
AA seq
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MIFRTSYLLGAIACALVTLSAANISVPVHAETLKITGPNGEVKQSPKRQYGPTTSADTFW
SIAQKLRPNENISVYQVMAALYDANPHAFSGNNYNTLERGMILLVPSEQVMAGIPQRLAK
ERADRDDQRFQTPAKAVVRAPVTPSRTLQIVPDSKPAVVAAKPSVDMVEKRIADELKIKL
EAAEHKILMLTEELGRAQDELVVKAGDSKALTTKLEELSLQVSSLEEDFYQLNEKNQTLK
ASYQQLIEDTTEVEAPVVEEAPDDFWRNLTDSTLMLVLMAALPLLLIFLILFLLMRRSSK
KKMQTEVAAAAAIAAGASAAAMADMLAEDEHDIEGDEGDQAVHLDVEEADSLDDLLDLSS
IDLQPEVEMGSDAEMDMASEMFIAEDSAKEEEGTSLDDLWAEAMEEQEDELEPLKPDDDD
LDSFFANLEEETPAEADVAESASDLDDIDAVLSEFAADEVEPPQLESDDDDIDAMLAAFG
TGDDKPSSQDDAQVEAADDDIDAMLAEFNIGKEDSVSTEVTAVEEESESVDDIDAMLAEF
NTGKSDSLSTEETAAEDIAAEDIAAEDIAAEDTAAEPQAEPADDDIDAMLAEFNTGKADS
ISTEETAAEDIAAEPQAEPADDDIDAMLAAFDAKKEDAETDSDLEAVNDAPENELAVDEI
DSLLAEIETTPEELEADAIAAELDEELAAEPQAEPADDDIDAMLVAFDSKKDDDAEVTDS
EVNAVSEAPLNEKAVDEIDSLLAEIETTPEELEADAIAAELDEELALSADTGADTEASDT
DIDSLLSELEKTPEEIEAEAIAAELAAELESDSDLGLGLNTNENTDSEIAQDASAEPQSE
PSDDDINSLLSELEKTPEEIEAEAVAAELAAELESDSDLSLGLNTNENTDSEIVQDASAE
PQSEPSDDEINSLLAEIETTPEELEADAIAAELDEELSLSADTDADDEILDTNIDSLLSE
LEKTPEEIAAEAIATELEPELEQEPELEPELNLEPESAPDTSAEQQNEPADGDLDSLLAE
FESDAPTIDTQALAEDEQGELTDAISAEPDTDQTAEVTDSPAAREDDFDTSFAGPESEGE
AEVETEAEAEVEAEVETEVEAEVEAEVEAEVEAEVEAEVEAEVEAEVEAETETEAEIEPE
GETQAEAEAEAEAEVEAEVETEVETEVETEVEAEVEAEVEAEVEVEAEVEAEVEAEVEAE
TEAEIEPEGETQAEAEAEAEVETEADTEADTEAGLDVETEAEIESEAIADLDSEMSPEIE
ADLELETDELALEEFQSSEPEQVAATTDEDALAASETSTLSDSDFDTDDDEESLDIDTDE
LDALLGQLNHAQTLADAGAVETEVEAEGDAALGTNELEPELVETADTELEQDALEPIELE
SEAATELELELEPESQLEPMAEDLAMVPEQEPEIEPEPEIESEPEPRTEAPELQLEPEVE
QTPEAPSTEDESSLTLDDDDLFSTENNDEVEDIDFSLLDDEDEDLDVSDAKPAAVFDEAK
ADAELAALLASMNDTQDEDFIFEDDEPTDLDVSAEPKQQSSPQASAAEKAKENSFFNDLK
ANKKPEPAPLEWDLGTTADSSSSKPEVEDNQADDPDFNDDNLLAAFAENVASSGEEEIFS
VEDDFEITDENLTVEEALAALDADEHVDLLNEDSLATFEVENGYIDINKLLNDADEGGDS
SDQYKDIDVSMDDDEISSLIGNTSMIDVDDEENSVNAKLDLARAYIEIEDADSAKALLKE
VQLDGNDRQKSEAASLIKGLR
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcgtacttcatatttgctgggcgccatagcttgcgcccttgttaccttatct
gcggccaacataagcgtaccagttcacgctgagacattgaaaattacaggcccaaatggt
gaagtaaaacaatcacctaagcgtcagtatggcccaacaacttccgccgataccttctgg
agcatagcccagaagttgcgtcccaatgaaaacatcagcgtttatcaagtgatggcagcg
ctatatgatgccaatccccatgcctttagcggcaataattacaacaccttagaacgtgga
atgatcttattagtgccatcggaacaagtgatggcagggatccctcagcgtttagcgaaa
gaacgtgccgaccgggacgatcaacgttttcagactcctgccaaagctgtggttcgagcg
ccagtcaccccttctagaacattgcaaattgtcccagatagcaagcctgcggttgttgct
gccaagccaagtgtggacatggttgaaaaacgcattgccgatgaacttaaaatcaagcta
gaagcagctgagcacaaaatattgatgctcaccgaagagcttggccgtgcccaagatgag
cttgtcgtcaaggcaggcgacagcaaggcattgacaacaaaacttgaagagttgtcctta
caagtgtcaagtctagaagaagacttttatcagcttaatgaaaaaaatcaaacactaaag
gcaagttatcaacaattgattgaagacactactgaagtggaagccccagtggtggaagaa
gcaccggatgatttttggcgcaatttaacagacagcaccctaatgctagtgctaatggct
gcgctgccattattattgatattccttattctgttcttgctaatgcgtcgcagcagcaag
aagaaaatgcaaaccgaggtggcagcggccgctgcgattgccgcaggagccagtgctgct
gcgatggcggatatgctggctgaagacgaacatgacattgaaggggacgaaggagatcaa
gccgtgcacttggatgtggaagaggccgattctctggatgacttactggatctaagcagt
atcgatcttcagcctgaagtggaaatgggcagtgacgctgaaatggatatggcgtccgaa
atgttcatcgccgaagacagcgccaaagaagaggaaggcacttctttggacgatctttgg
gctgaagcaatggaagagcaagaagatgagcttgaaccgctcaaacctgatgatgacgat
cttgatagcttctttgctaatttagaggaagaaacacctgctgaggctgacgtggccgaa
agtgcaagtgatctcgatgatatcgatgccgtattatctgaatttgccgccgatgaagta
gaaccacctcaactggagtcagacgatgacgacatagatgccatgttggcagcctttggc
actggagatgacaaaccctccagccaagatgatgctcaggtagaagctgcagatgacgat
atagatgccatgcttgccgagtttaacataggcaaagaagacagcgtctctactgaagtg
actgcggtcgaagaagaatctgagtcagttgatgacatagatgccatgctggccgagttt
aatacgggcaaatcagacagtctttccactgaagagactgcagctgaagatatagcagct
gaagatatagcagctgaagatatagcagctgaagatactgcagcagaaccacaagccgag
cctgccgatgatgatattgatgccatgctggccgagtttaatacgggcaaagcagacagc
atctcaactgaagagacagcagctgaagatatagcagcagaaccacaagccgagcctgcc
gatgatgacatcgatgccatgttggccgcgttcgatgcgaaaaaagaggatgcagaaaca
gacagtgacctagaagctgttaacgatgcgccagaaaatgaactcgctgtcgatgagata
gattcattattagccgaaattgaaacgaccccagaagaattggaagccgatgctatagca
gctgagcttgatgaagagcttgcagctgaacctcaagccgaacctgccgatgatgacata
gatgccatgttggtggctttcgattcaaaaaaagatgatgatgcagaagtcacagacagt
gaagtgaacgctgtcagcgaagcaccactcaatgagaaagctgtcgatgagatagattca
ttgttagctgaaattgaaacgaccccagaagaactggaagccgatgctatagcagctgag
ctagatgaagagctggctcttagcgctgacactggagcggacactgaggcatcggataca
gatatcgattcattgttatctgagctcgagaagacccctgaagaaatcgaagccgaagcc
atagccgcagagcttgccgccgaacttgagtctgactcagatctgggcttagggttaaac
acaaatgaaaacactgactcagaaatagcacaagacgcgagcgcagagccgcaaagcgag
ccatcggatgatgatataaattcattattatctgagctcgagaagacccctgaggaaata
gaagccgaagccgtagccgcagagcttgccgccgaacttgaatctgactcagatctgagc
ttagggttaaacacaaatgaaaacactgactcagaaatagtacaagacgcgagcgcagag
ccgcaaagcgagccatcggatgatgagataaattcattactggccgagattgaaacgacc
ccagaagagctggaagccgatgccatagcagcagagttggatgaagagctgtcccttagc
gctgacactgatgcggacgatgagatattggatacgaatatcgattcattgttatctgag
cttgagaagaccccagaggaaatagcagccgaagccatagccacagaacttgaaccagaa
ttagaacaagaaccagagcttgaaccagaactcaacttggaacccgagtctgcgccagac
acaagtgcagagcagcaaaatgagcccgcggatggggatctggattcattgctagctgag
tttgaatctgatgccccaactatcgatacccaagcgttagcagaggatgagcagggtgaa
ctcaccgatgccatcagtgcagagcctgacacagatcaaactgctgaagtgactgatagc
ccagccgcaagagaagacgatttcgatacctcattcgctggacccgagtctgaaggcgaa
gccgaagtcgaaactgaagccgaagcagaagtagaagctgaagtagaaactgaagtagaa
gctgaagtagaagctgaagtagaagcagaagtagaagctgaagtagaagcagaagtagaa
gcagaagtagaagcagaagtagaagcagaaactgaaactgaagcagagattgaacctgaa
ggtgaaactcaagccgaagcagaagccgaagcagaagcagaagtagaagctgaagtagaa
actgaagtagaaactgaagtagaaactgaagtggaagctgaagtagaagcagaagtagaa
gcagaagtagaagtagaagctgaagtagaagctgaagtagaagcagaagtagaagcagaa
actgaagcagagattgaacctgaaggtgaaactcaagccgaagcagaagccgaagcagaa
gtcgagactgaagctgacactgaagctgacactgaagctggcttagacgtcgaaactgaa
gctgaaatagaatcggaagctattgcagatcttgattcagagatgtctcccgaaatagaa
gccgacctagagcttgaaaccgatgagttagcgcttgaggagtttcaatccagtgagcca
gagcaagtcgcagcaacgactgatgaagatgcgttagcagcttcagaaacgagtaccctc
agtgacagcgactttgatacagacgatgatgaagaaagtcttgatatcgataccgacgag
cttgatgccctattaggacagttaaatcatgctcaaaccttggcggatgccggcgcggtt
gaaactgaagttgaagctgaaggtgacgctgcacttggaacaaacgagcttgagccagaa
ctggttgaaaccgccgatacagagcttgagcaagatgcacttgagccaatcgaactagaa
tccgaagctgccactgaactagaactagaactagaaccagaatcacagcttgaacctatg
gcagaagatctcgccatggtacctgagcaggaacctgagattgaaccagaacctgagatt
gagtcagagccagaacctaggacagaagcgcctgagttacaactggaacctgaggtagag
caaacaccagaagcccccagtacagaagatgagtcgtcattaacactggatgatgacgac
ctttttagcactgaaaataacgatgaagtagaagatatagatttctcgttactcgatgat
gaggatgaagaccttgacgtaagtgacgctaagcctgctgctgtgtttgatgaagctaaa
gccgatgcagagctcgcagccctattggccagtatgaatgatactcaggatgaggacttt
atctttgaagatgatgaaccaaccgatcttgatgttagtgctgagccaaaacagcagagt
tcaccacaggcatcagcggcggagaaagccaaggaaaatagcttttttaatgatttaaaa
gccaataagaaacctgaaccggcccctttagagtgggatcttggcactacggccgactca
agttcatcaaagcctgaagttgaagacaatcaagctgacgacccagattttaatgatgat
aacctgctggcagccttcgctgagaatgtggcatcgagcggtgaggaagaaatcttcagt
gttgaagacgactttgaaatcacagatgaaaatttaaccgtcgaagaagcattggcggcg
ttggatgcggatgagcatgtagacttattaaatgaggattcattggccacgttcgaagtg
gaaaatggctatattgatattaataagttactcaatgatgccgatgaaggcggtgacagc
agcgatcaatataaagatattgacgtgagcatggatgatgatgaaataagctccttgatt
ggtaacacttcaatgatagatgtggatgatgaagagaattcggtcaatgctaaacttgat
ttagcaagggcctatatcgaaattgaagatgccgatagtgccaaggcgctattaaaagag
gtgcagttagatggcaacgacagacaaaaatctgaggctgccagtttgattaagggcttg
aggtaa
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