Shewanella denitrificans: Sden_1504
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Entry
Sden_1504 CDS
T00344
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_1504
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_1504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABE54789
UniProt:
Q12P37
LinkDB
All DBs
Position
complement(1742665..1746732)
Genome browser
AA seq
1355 aa
AA seq
DB search
MSHESPNLPEETCALIDTHASDNKNLAASSKPKLHKAFARLLKWLKHSLRLSLYLPLALL
MLLALMLGTPMGSHGAIILANNLVADLELEYLSGTLNREISLSHASYRLYELSIEARGIT
FGWQPSCLLNWQVCIQNLSAQAVSVSYQDSAQDPSAAVVDSYDEHQEPEQQTLLDTVYAA
FEMPMAILLSHTSLKKIEVKINDMDFKADEVSGTAIWNSSGLTVRLLESQGLDVSIPQTT
ANTPSPSIEGLEDLSQFALTDLPQITLPFPIRVKRFIATQSLLTLGERQDSFSHIELKAS
MKDSLLRVSDLQLSYAEASAVLTGQLAFSANYPLEFNLALNIPRLSEFPGLADQKINLGF
SQDLSNLKLQAQGRGQSEFNLQADIALTSDTLDYQLSLTDSKLQWPLSAPQYHGNIEALM
SSGNIHSQQLSLLGDITAKLKDKVNDKINDTKSTVTIPNSAALPSSEKHLSYTPPESVTM
KFDTQLKHQNQMLTVQQLTMSSNAGQLNVSAEVNYHIGLQDNLQWHALLGTQGLQLQQLL
PLIPNELLSPELSQTVNLTTSMINGSLTTQGEMSAKAWQVSVTQANLSGNVNGYPLYITG
DISADSQFNLQANALEAQALGASLSVHGEVKDQWDVKAKLDVPDISQWLSYARGSITATA
NIGGPQATPLLTMQTELSQFSAKGASLDYVQLLGSYSPKEAHQFTLKLTNNLLNWKKHQV
TNVSLLAQGDISQQSLTISSEGELAIKGELNSQYQQLTDAFSAELARLSITTKVGQWQLN
NPAKLEWQQGKGSISPFCLQHPQSRLCLVDPINIGKQGQLNLAFSGNPGQLLAPVLSKKM
RWDGEATLAAQVHWREGTRPTAKLDFALLPGNITLIRAKNNLISLDYQTFNLAAQLDEKA
LSGQIGINSEGIAQFQSQFSIANDEQRSLSGEIDVNHLNLQPFGEFFPQLATLEGVISTK
LLLAGTLAEPDISGNIRLVDGAVALASNPTLMDKIYLDLALSGQQGNLSGHWFMGKGEGK
VLGTLSWPQGQFSGELAIAGDSLAFIQPPLAILDVSPAINLNFNRQKLSVTGDINVPSGQ
IKIVPLADGGVPVSTDVVFNDSISAQEIKTSPYAIIADLNISVGKGVLIDGLGLTGKLGG
KLVLKQKAFKPPLLYGDIKIRQGSYRFMGQSLKISTGEVQFVGSAENPNLNIQAVRQIKD
EDLTAGVRITGTPLRPVVTLFSTPAKEQAEILSYILKGTGFTNSNNQQNNALMMSAALSL
GSQFDGGAINSLGSTASGLIEKFGFSNVQLDANDEGRVALSGYIGEDLMVKYGMGVFNPG
YEMTVRYYLLSQLYLETVSGTLSQSLDLYYSFDIE
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgagagccccaatctgccagaagaaacctgcgccttaattgacactcatgcc
tcggacaacaaaaaccttgccgcatcgagtaagcctaagttacacaaagcattcgctagg
ctgctgaaatggctcaaacacagcctaagattaagcctatatttacccttggcactgctt
atgcttttggccctaatgctcggcacgcccatgggcagccatggggcgattattttagcc
aataacttagtggcggatcttgagcttgaatacctgtcaggcacattaaaccgtgaaatt
agcctgtctcacgccagttatcgactctatgagctgagtattgaagccagaggcatcacc
tttggctggcaacctagttgcttgcttaattggcaagtgtgcatccaaaatcttagcgct
caagctgtgagtgtcagctaccaagactcagcccaagatccatccgcggctgtggttgac
agctatgatgagcaccaagagccagagcagcaaacactgctagacactgtctatgctgcc
tttgagatgcccatggccatattgttaagtcacactagccttaagaaaattgaagtcaag
atcaatgatatggactttaaggccgatgaagtcagtggcaccgccatttggaactcttca
ggattaaccgttcgcctcctagaaagtcaggggctggatgtgtctattcctcaaaccact
gccaatacaccaagtccaagcattgaaggtttagaagatttaagccagtttgccttaacc
gacttaccacaaatcaccttgccgttccctatccgggtaaagcgttttatcgcaactcaa
agcttgttaaccttaggcgagcgccaagacagtttctctcatattgaacttaaagccagc
atgaaggactcgctactcagagtcagtgacctgcaactcagctatgctgaggctagcgcg
gtattaacaggtcagctggcgtttagcgctaactatccgctggagttcaacctagctctc
aatataccccgtcttagcgagttcccagggcttgctgatcaaaaaatcaatttagggttt
agccaagatttaagtaacctcaaactgcaggctcaaggtcgaggtcaaagcgagtttaat
ctgcaagccgatatagccctcacctcagacacgttagactaccaactcagcctgacagac
agtaagctgcagtggccattatcagccccccaataccacgggaatattgaggcgctaatg
tcctctggcaacattcatagccagcagctaagcctgcttggtgacatcacagctaagctt
aaagacaaagtgaatgataagattaacgacacaaaaagtactgtcactatcccaaactca
gcggctttaccaagctcagagaaacacctaagctataccccccctgaaagcgtgaccatg
aagtttgatactcagcttaagcatcaaaaccaaatgctcacagttcagcaactgacaatg
tcatccaacgctgggcaattaaatgtcagcgctgaggtcaattatcacattggcctacaa
gacaatttacaatggcacgcgcttctcggcactcaagggttgcaattacagcaactcttg
cccttgatcccaaatgagctattaagccctgaacttagccaaaccgttaacctcaccacc
agcatgataaatggcagcttaaccacccaaggggaaatgtcagccaaagcatggcaagtg
tctgtgacccaagccaacttaagtggcaatgtgaatggctacccactttatattacgggt
gatattagtgccgatagtcagtttaacctccaagcgaacgcgctagaagctcaggcccta
ggtgcaagcctaagtgtccacggtgaagtgaaggatcaatgggatgtgaaggctaagctc
gatgtgcccgatatcagccaatggctaagctacgccagaggcagcataacagccacagcc
aatatcggcggcccacaagcgaccccattactgacgatgcaaactgaattaagtcagttt
agtgccaagggcgcaagccttgattatgtgcagcttttaggcagttattcccctaaagag
gctcatcaatttaccttgaaactcacaaacaatttactgaactggaaaaaacatcaagta
accaacgtgagcctgttagcccaaggggatattagccagcaaagcctgacaataagctcc
gaaggcgaacttgctattaaaggcgaattaaacagtcaatatcaacagttaacagacgcc
ttcagcgccgaactcgcgcgccttagcatcaccaccaaagttggccaatggcaactcaat
aatcccgctaaactagaatggcaacaaggtaaaggcagcatcagtcccttttgtttacag
cacccacaaagccgactttgcctggttgaccctatcaatatcggtaagcaaggccagctt
aatttggccttcagtggcaatccgggtcagttactggcacctgtgctatccaaaaagatg
cgttgggatggcgaggcaacactggcagctcaagtgcattggcgtgaaggcactcggcca
acggctaaactcgattttgcattactgccaggcaatatcaccttaattcgtgccaaaaat
aacctcattagccttgattatcaaacatttaatctcgcggctcagctggatgaaaaggca
ctttcaggccaaattggcattaactctgaaggcatagcccaatttcaaagccagttcagt
atcgctaatgatgagcagagaagcttgagcggcgagatagacgtcaatcatttaaacctg
caaccttttggggagtttttcccccagcttgccacccttgaaggtgttatttccactaag
ctcttactcgctggcaccttagccgagccagatatttctggcaatattcgcctcgtcgat
ggcgctgttgccctagccagtaacccgacgctaatggacaaaatttacctagacttggcc
ttatccggtcaacaaggcaacttatctggccactggtttatgggtaaaggcgaaggcaag
gtgctaggcacactgagttggcctcaaggtcaatttagcggagaactcgccattgcaggt
gactccttagcctttattcagccaccgctggccattttagatgtgtcaccggcaataaac
ctcaactttaatcgccagaaattgtctgtcacgggtgatatcaatgtaccgtcgggacag
ataaagatagtcccactggcggatggcggcgttcctgtctccacggatgtggtgtttaat
gactccatttcggcccaagaaattaaaaccagtccttatgccatcattgccgatctgaat
atcagtgtcggcaaaggggtattgatcgatggcttaggtttaaccggtaagctaggtggt
aagctagtattgaaacaaaaagccttcaaaccaccactgctctatggcgatatcaagatc
cgccagggcagctatcgttttatgggccagagcttaaaaataagtacaggtgaagtgcaa
tttgtcggctcggctgaaaatcctaaccttaatattcaagcggtgcgacaaattaaagat
gaagatctcaccgcaggtgtgaggatcactggcaccccactaaggccagtggtcacctta
ttttcaactcccgccaaggagcaagcagaaatactgtcgtacattctcaaaggcacaggt
tttactaacagtaacaatcagcagaacaatgccttaatgatgagtgcagccctcagttta
ggttcacaattcgatggcggtgccatcaatagcttaggcagtactgcctcaggattaatt
gagaaatttggctttagcaatgtacaactcgatgccaatgacgaaggccgagtcgccctc
agtggctatattggcgaagatttgatggtgaaatacggcatgggcgtctttaatcccggt
tatgaaatgacggtcaggtattacttattgtctcagctctatctagaaaccgtatcaggc
accttaagccagtcgctggatctctactacagtttcgacatagagtaa
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