Shewanella denitrificans: Sden_1524
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Entry
Sden_1524 CDS
T00344
Name
(GenBank) TPR repeat
KO
K07114
Ca-activated chloride channel homolog
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_1524
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_1524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_11
TPR_1
TPR_2
ANAPC3
TPR_16
TPR_7
TPR_8
TPR_12
TPR_19
TPR_14
TPR_Slam
TspO_MBR
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ABE54809
UniProt:
Q12P17
LinkDB
All DBs
Position
complement(1770103..1772178)
Genome browser
AA seq
691 aa
AA seq
DB search
MPLHFIRPEWLLLLLPLALLSLLAWRKNSQQSAWQHYIAPHLTSALISPSMQSSKHPTWL
LAAAWFIAVIAAAGPAVNKQNLPVFATEQGRVLVMDMSLSMLATDMSPNRLSQAKFRASD
LISQLKEGETGLIAYAGDAFTISPLTRDNATLLNLLPSLSPDIMPARGSDLAGALRLAQS
LLAQGGHINGDIIVLTDGISSKQFDNAKASLKGSRYRLSILALGSEQGAPIRLADGQLLK
DNVDDVIIAKTNYGLLQKLARYQKGILVPAQADGSDLKQLQDWLATDGDARATELEGESW
QDLGPYLALLLLLPCLLSFRRGLLPLVALFMFYQPTSAQASLWDDLWQTRDQQANAAFEA
EDFHTASDKFDDPLWRASAHYKAGDFEAALKGFEQDSSANGLYNQGNALMHLGKIDKAIK
RYQEALALKADFPEASRNLALAQQAKQDKKQGDNQSAENGESGEDGDANEGGDKSKGSNS
GSDDSDDGDDSNSDSSDSSSNRAGSNNSGSKGTESKDSDTQDNQDASSASQDDDTSEQGG
DKSDETNASSGGQQSDVDEPSSEKQDSGGTDDQAMSEQQGAQSASEQGKDPNSQAQENEA
SMQAELEKPASGSKQQTAVGEKPSDNAPEQQTAAGEMLAPTQAQTQALPAEMERALRAVS
EDPQVLLRNKMQLEYLKRRQEAQAPKDDEQW
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcattttattcgccccgagtggctattattgctgctgccattagcattatta
agcttgcttgcctggcgtaaaaacagccagcaatcggcttggcagcattatatcgccccc
catttaacctcggcacttattagcccaagtatgcaaagcagtaagcaccccacttggctg
ctggccgccgcctggtttattgccgtcatcgccgcagcaggacctgcagtcaacaagcaa
aatttgccagtatttgcgacagagcaaggccgggtgctggtgatggacatgtcgttatct
atgctagctaccgacatgagccccaaccgcttatctcaggctaaatttcgggcaagcgat
ctcatcagtcagcttaaagaaggtgaaacaggacttatcgcttatgcaggtgatgccttt
accataagccccttaacgcgcgataacgccaccttgctgaatctgttaccgagcttatct
ccagatatcatgccagctcggggctcagatcttgctggtgcactacgcctagcacaaagc
ttgctagcccaaggtggacatatcaatggtgacattatcgtgctcaccgacggcatttcc
agcaagcaatttgataatgctaaagccagtctcaagggcagtcgctatcgcttgtctatc
ttggctctaggcagtgagcaaggtgcccctattcgtcttgccgacggacaattgctcaaa
gacaatgttgatgacgtcattattgccaagaccaactatggtttattgcaaaagcttgct
cgatatcaaaaaggcattcttgtcccggcgcaggccgatggcagcgatcttaagcaattg
caagactggcttgccaccgatggcgatgccagagccactgagcttgaaggtgaaagctgg
caagacttaggcccctatttagccttattattgttactcccttgcctattaagctttcgt
cgcggcttgttgcctttggtcgcactatttatgttttatcaacccactagcgcccaagca
agtctatgggatgacctttggcagacgcgggatcagcaggccaatgcggctttcgaagct
gaagactttcatactgccagcgacaaattcgacgatcccctttggcgtgccagtgcccac
tataaggctggtgactttgaagccgcacttaaaggatttgagcaagatagcagtgccaat
ggcttatacaatcaaggcaatgcactcatgcatttaggcaaaatcgataaagccatcaaa
cgctaccaagaagcattagcgctaaaggccgacttccctgaagccagtcgtaatctcgcc
ttagcacaacaagctaagcaggacaaaaagcaaggagacaatcaatccgcggaaaacggt
gagtctggtgaagacggcgacgccaatgagggaggcgataagagtaaaggctcaaactct
ggctctgatgactcagatgacggcgatgacagtaactccgactcgagcgactcaagctca
aacagggctggttcaaataactcaggctccaagggcactgaatctaaggactctgacacc
caggataatcaagatgccagcagcgcatcacaagatgatgacacctcagagcaaggcggc
gataagtctgatgagactaacgcctcatctggcggtcaacaatctgacgttgatgaaccg
agttcagaaaaacaagacagcggcggcaccgatgatcaagcaatgagcgagcaacaaggg
gctcaatcggcgagtgaacaaggtaaagaccccaatagccaagctcaagagaatgaggct
agcatgcaagccgagctggaaaaacctgcttcaggctcaaagcagcaaactgctgtgggg
gaaaaaccatctgataacgcccccgagcaacaaacggctgcgggagaaatgttagcgccc
actcaagctcaaactcaggcattacccgcagaaatggagcgagcccttcgcgctgtcagt
gaagacccccaagttctgctgcgaaataaaatgcaacttgaataccttaagcgccggcaa
gaggcgcaagcacctaaggatgatgaacagtggtaa
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