Shewanella denitrificans: Sden_1530
Help
Entry
Sden_1530 CDS
T00344
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00071
Fatty acid degradation
sdn00280
Valine, leucine and isoleucine degradation
sdn00310
Lysine degradation
sdn00362
Benzoate degradation
sdn00380
Tryptophan metabolism
sdn00410
beta-Alanine metabolism
sdn00640
Propanoate metabolism
sdn00650
Butanoate metabolism
sdn00907
Pinene, camphor and geraniol degradation
sdn00930
Caprolactam degradation
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01212
Fatty acid metabolism
Module
sdn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Sden_1530
00650 Butanoate metabolism
Sden_1530
09103 Lipid metabolism
00071 Fatty acid degradation
Sden_1530
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sden_1530
00310 Lysine degradation
Sden_1530
00380 Tryptophan metabolism
Sden_1530
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Sden_1530
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sden_1530
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sden_1530
00930 Caprolactam degradation
Sden_1530
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Sden_1530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Sden_1530
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Sden_1530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ABE54815
UniProt:
Q12P11
LinkDB
All DBs
Position
1777158..1779284
Genome browser
AA seq
708 aa
AA seq
DB search
MEKTFNLARRDDGIAVLTMDVPGETMNTLKAEFGPEISAVLAEIKSDSSIKGLVVISGKA
DSFVAGADISMLDACTSADAAKALSQQGHQVFAELEGLSIPVVAAINGACLGGGLELALA
CHLRVCSDDAKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDLMLTGKQVRPKQALKM
GLVNDVVPNSILLETAVNLAKKGKKTAAPVKKSFINKVLESTSFSRDIIFDQARKQVEKK
TQGNYPAPGKIIDCVRQGLNKGMVKGLEVEATHFSTLVMSSESAALRSLFFATTEMKKET
GVDGVEPRKVRKAVVLGGGLMGGGIASVTTTKAKIPARVKDISDKGLSNALAYAYKLLDK
GVKRRHMTPSARDGLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPIGQIAAAAERPENVIGLHYFSPVEKMPLVEVIAHEKTSAQTIATTVAFAR
KQGKTPIVVKDGAGFYVNRILALYMNEAAQLLLEGQRIEHLDKSLVKFGFPVGPMTLLDE
VGIDVGAKISPILEKELGERFQAPSAFAKLLNDDRKGRKNSKGFYQYGPKAKKSKLVDES
VYAVLGILAASNKDSKEISERCVIQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLG
GPFRYMDSLGAAHMVARLEHYQKLHGERFAPSEKLKAMAANSQTFYTK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatttaatttagcccgccgcgatgatggtatcgcggtgttgaccatggac
gtcccaggcgaaaccatgaacaccctcaaagccgaatttggcccagagataagtgctgta
ttagctgagataaaatcagactctagcattaaaggcctagtggtgatttcgggtaaagcg
gactcatttgttgctggcgccgatatcagcatgttggatgcttgcaccagcgcggacgcc
gctaaagccttatctcagcaaggccatcaagtgtttgcagagcttgaaggattaagcatt
cctgtggttgcagctatcaatggcgcttgccttggtggcggtttagagcttgcgttagca
tgtcatttacgtgtgtgtagtgatgatgctaaaactatgcttggggtcccagaagtgcag
ttggggttactgcctggcggcggcgggacccagcgtctaccgcgccttgttggcataaca
acagcgcttgatttgatgctaaccggtaagcaagtacgtcctaagcaagccttaaaaatg
ggtttagttaatgatgtggtgccaaacagtatcttgcttgaaactgcggttaatttagct
aaaaaaggcaaaaaaacggctgcgccagtgaagaaaagcttcattaataaagtgttagag
tcaaccagctttagccgcgatattattttcgatcaggcgcgcaagcaagttgagaagaaa
actcagggtaattatcctgcgccaggaaaaattattgactgcgtacgtcaaggattaaac
aaaggcatggtaaaaggccttgaagttgaggccactcatttttctactctagtgatgtca
tcagaatcagcggcgcttcgcagtttgttttttgccaccactgaaatgaagaaagagacc
ggagtcgatggtgttgaaccacgtaaagtgcgtaaagccgtggtactaggtggcggcttg
atgggcggcggtatcgcatcagttaccaccactaaagccaagatcccagctcgcgttaaa
gacattagtgacaaaggcctgagtaatgccttagcttatgcttataaattattggataag
ggtgttaagcgccgccatatgacaccatcagcccgtgatggtttaatggcgctgatgacc
acaaccactgaatataaaggcgtaaaagatgccgatattgtggttgaagcggtatttgaa
gatttagctcttaagcatcagatggttaaagatatagagcgtgaatgcggcgaacatacc
atttttgcctcaaacacttcgtctttgcctattggtcaaatcgctgcggccgccgagcgt
cctgaaaacgtgattggtctgcactatttctcaccggttgagaaaatgcctttggttgaa
gttattgctcatgagaaaacttcggcgcaaactattgcaactactgtggcttttgcccgc
aagcaaggcaagacacctatcgtagttaaagatggcgcgggcttttatgtgaaccgtatt
ttagcgctttacatgaatgaagcggcgcagctgttactggaaggtcagcgtatcgaacac
ttagataagtcattggttaagtttggcttccctgtggggcctatgaccttgcttgatgaa
gtgggcatagatgtgggcgccaaaatatcaccgattctagaaaaagaattgggcgagcgt
ttccaagcgccaagtgcatttgccaagttgttaaatgatgaccgtaaggggcgcaagaat
agcaaaggcttctaccagtatggccctaaagcgaaaaaatctaagcttgttgatgaaagc
gtatacgctgtgcttggcattttagcggcctctaacaaagacagcaaagaaatcagtgag
cgttgtgttattcaaatgcttaatgaagcagtgcgctgtttagaagaaggcataattgct
tcaccacgggatggtgatatcggcgctatcttcggcataggtttccctcctttcttgggc
ggccctttccgttatatggacagccttggggctgcacatatggtggcaagattagagcat
tatcagaagcttcatggtgagcgtttcgccccaagtgagaagcttaaagctatggctgcg
aatagtcagactttttacactaagtaa
DBGET
integrated database retrieval system
