Shewanella denitrificans: Sden_1631
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Entry
Sden_1631 CDS
T00344
Name
(GenBank) membrane-bound lytic murein transglycosylase B
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_1631
Enzymes [BR:
sdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sden_1631
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sden_1631
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GFIT
Motif
Pfam:
SLT_2
LasA_N
Mannosyl_trans4
Motif
Other DBs
NCBI-ProteinID:
ABE54915
UniProt:
Q12NR1
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All DBs
Position
1894062..1895051
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AA seq
329 aa
AA seq
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MFCKSVVVFCVYLTCCNLVSAQESGATFSDYLSGLKRVALEANISPMTVAQHFPKIKPFK
RAQGHNSVFENTNLEQYIPKKVPDILVSTGRIFYQANEKAFDHIATKYGVQPRFLIALWG
LSSDFGERQGRYPVLSVLASSAFEASLSGQVDHYGELFYIDEFIAALKILERYPYRFEDL
TSSQQGTMGHMQIRPSQFLAYAKDGSGDGHIDIWHDISDAMTTTANMLQDIGWQSDSTWG
RQIRATKALSADNISLAVQKTFSEWQQLGIRRFEGGDLPNRDDMRVSLLAPDGTDGRMYL
IYFNYRALKRVNQDDKYLLAATYLSERIK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcaaatcagtagttgtattttgtgtatacctaacctgctgtaaccttgtttca
gcgcaggagagcggggcgactttctctgattatctatcagggcttaagcgtgtcgcattg
gaagctaacatctcgcctatgaccgtggcgcagcactttcctaaaatcaagcctttcaag
cgtgctcaaggtcataatagtgtcttcgaaaacactaatctagagcaatacatcccaaag
aaagtgcctgatattctcgtcagtactgggcgcattttttatcaagccaacgaaaaagct
tttgatcatattgctactaaatatggggtgcaaccgcgctttcttattgccctatggggc
ttgagctccgactttggtgaacgccaagggcgttatcctgtgctatctgtgttggcctca
tcggcttttgaagcgagtctaagcgggcaagtggatcattatggtgaattattctatatt
gatgaatttattgcagctcttaaaattttagaacgctatccctatcgctttgaagatctc
accagtagccagcagggcaccatgggtcatatgcaaataagaccaagccagtttttagcc
tatgctaaagatggcagtggtgatggtcatatcgatatttggcatgatattagcgatgct
atgacaaccacagccaatatgctacaagacataggctggcaatctgactcaacttggggc
cgacaaattagggctactaaagcacttagtgcagacaatatcagtcttgcagtgcaaaaa
accttctctgaatggcaacaattaggcataaggcgcttcgaaggcggtgatttgcccaat
cgtgacgatatgcgggtgtccttgctcgctcccgatggcacagatggccgcatgtatctg
atttattttaattatcgggctcttaaacgggtcaatcaagatgataaatacttattggct
gcgacctatttgtctgaaagaattaaataa
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