Shewanella denitrificans: Sden_1831
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Entry
Sden_1831 CDS
T00344
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00020
Citrate cycle (TCA cycle)
sdn00480
Glutathione metabolism
sdn00720
Other carbon fixation pathways
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01210
2-Oxocarboxylic acid metabolism
sdn01230
Biosynthesis of amino acids
sdn04146
Peroxisome
Module
sdn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdn_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sden_1831
09102 Energy metabolism
00720 Other carbon fixation pathways
Sden_1831
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Sden_1831
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sden_1831
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Sden_1831
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
ABE55115
UniProt:
Q12N61
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All DBs
Position
2157091..2159313
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AA seq
740 aa
AA seq
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MKDNSPTIIYTETDEAPALATLSLLPIIRTFTSAAGVKVETRDISLSGRILANFPEKLTA
EQKIADALTELGEMANRPEANIIKLPNISASIPQLKVCIAELQAKGYDIPNYPDEPKNDA
EKETQSRYDKIKGSAVNPVLREGNSDRRAPTSVKNYAKKHPHSMGKWASDSKSHVAHMNE
GDFYASEQSVTLTKADKVSIVFEKADGTEQVLKAGLSLLTDEVIDAAVMSNKALIEFYSR
EIEAAKSEDVLLSLHLKATMMKVSDPILFGHAVKVFFKDVFVKHGALFAELGVDVNNGFG
DVYAKIKSLPEAKRAEIEADIAAVYAARPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLKDTKALIPDRCYAGVYQETIAFCKANGAFNPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIKAKGTVKVINQAGDVLMSHDVDSGDIYRMCQVKDAPIRDWVKLAVKRAR
LSNTPAIFWLDSKRAHDAELIKKVNQYLPEHDTSGLDIQIMSPVEATRATLARIIKGEDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTQSNPKAQVLADSLDVAIGVFLDTNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTADAELAAHFATLANALSTQEEIIIAELNGSQGPAVDLGGYYRL
DLAKASKAMRPSATLNALID
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataattctccaactatcatctacacagaaaccgatgaagcgccagcactggca
accttatctctattgcctattatacgcacctttacctctgcagccggggttaaagttgaa
acccgtgacatttcattgtcgggccgtatcctagctaacttcccagaaaagctaactgct
gagcaaaaaattgctgatgcgttaactgagttaggtgaaatggctaatcgtccagaagct
aacatcatcaagttgccaaacatcagtgcttctattcctcagttaaaagtctgtatcgct
gagcttcaagccaaaggctacgacattccaaactacccagatgagcctaagaatgatgct
gaaaaagaaactcagtctcgttatgacaagattaaaggcagtgcggtaaatccagtattg
cgtgaaggcaactctgaccgacgtgcaccgacgtcagtgaaaaactacgccaagaaacac
ccacattcaatgggtaagtgggctagcgattcaaagtctcatgttgcccacatgaatgaa
ggcgatttctacgctagtgagcagtctgtcaccttaactaaagccgacaaagtcagcata
gtgtttgaaaaagccgatggcacagagcaagtattaaaagcagggttaagcttactcact
gatgaagttatcgatgcggcagtgatgagcaacaaagccttaatcgaattctatagccgt
gaaatcgaagccgctaaatctgaagacgtgttgttatcactgcatttaaaagccaccatg
atgaaagtctcagatcctattctgttcggtcatgcggttaaagtcttcttcaaagacgtg
tttgttaagcacggcgcgttatttgctgaacttggtgttgatgttaacaacggctttggc
gacgtgtatgccaaaattaagtcgcttccagaagcaaagcgtgctgaaattgaagctgac
attgccgctgtgtatgccgcacgtccagcccttgccatggttgattctgataaaggtatt
acaaaccttcatgtgccaagtgacatcatcatcgatgcctctatgccagctgctattcgt
tcatcaggtcagatgtggggacccgatggccagttaaaagacactaaagccttgatccca
gatcgctgctacgccggtgtttaccaagaaacgatagccttttgtaaagccaatggcgcc
tttaacccaagcactatgggcagcgtgccaaacgtaggtctaatggcgcaaaaagccgaa
gagtacggtagtcacgacaagacattcgaaatcaaagccaaaggtacggttaaggtgatt
aaccaagctggcgatgtgttaatgagccatgatgtcgatagcggtgatatttaccgtatg
tgtcaggttaaagatgcacccattcgtgactgggtaaaacttgcagttaagcgtgcacgt
ttaagcaacacgccagccattttctggttagacagcaagcgtgctcacgatgcagagctt
atcaagaaagtgaaccagtatttacctgagcatgacactagcggcttagacatccagata
atgtcaccggttgaagcgactcgtgctaccttagcgcgcatcatcaaaggtgaggacact
atctcagtgaccggtaacgtattacgtgactacctaactgacttgttccccattcttgaa
ttaggcaccagtgctaaaatgctgtctattgtgcccttaatgaacggcggcggcttgttt
gaaacaggcgcaggtggcagtgcaccaaagcacgtgcagcaggttgagaaagaaggtcac
ttacgttgggattctcttggtgaattcttggccttagcggcatcccttgagcatttaagc
cagactcaatcaaaccctaaagctcaagtgcttgcagatagcttagatgtggccattggt
gtgttccttgataccaacaagtcaccttcacgccgtgtgggtgagcttgataaccgtgga
agtcacttctaccttgctatgtattgggcacaagccttagcagcgcaaacggcagatgct
gaacttgcggcgcattttgcaactcttgctaatgcacttagcactcaggaagaaatcatc
atagctgaacttaatggttcacaaggtcctgcggtagatttaggtggttattaccgttta
gatctggctaaagccagcaaggcgatgcgcccaagtgccactttgaatgcactgatcgac
taa
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