Shewanella denitrificans: Sden_1885
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Entry
Sden_1885 CDS
T00344
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sden_1885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdn03400
]
Sden_1885
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Sden_1885
DNA repair and recombination proteins [BR:
sdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sden_1885
RecFOR pathway proteins
Sden_1885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
ABE55168
UniProt:
Q12N08
LinkDB
All DBs
Position
complement(2212471..2212992)
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AA seq
173 aa
AA seq
DB search
MAIILGVDPGSRITGYGVIQCQGRQQIYLGSGCIRTSSDELPIRLKQIFEGLTEIIRQYQ
PEQFAIERVFMAKNADSALKLGQARGAAIVAATFADLPVAEYSATQIKSAVVGTGRAQKA
QVQHMIQQLFKLPAAPQADAADALGVALCHYHTHQSLVAMGGRASSRTYGRYR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggccatcattttaggggttgaccccggctcacgcatcacaggttacggcgtcatacag
tgccaaggacgacagcaaatttacctaggtagcggctgtattcgcaccagctctgatgaa
ctgcccatccgccttaagcaaatttttgaaggcttaaccgaaatcattcgccaatatcag
cccgagcaatttgccatagagcgggtatttatggcaaaaaatgccgattctgccctaaag
ctgggtcaagcccgcggcgcagccattgttgctgccacctttgctgatttaccggtggcc
gaatacagtgccactcaaattaaaagcgcggttgtgggtacagggcgggcgcaaaaagcc
caagtgcagcacatgatccaacaattattcaaattgcccgcggcgccacaggccgacgcg
gccgatgccctaggggttgccctgtgtcattatcacactcaccaaagcttggtggccatg
ggcggccgagccagtagcagaacttacggacgatacagatga
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