Shewanella denitrificans: Sden_1887
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Entry
Sden_1887 CDS
T00344
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_1887
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_1887
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_1887
03029 Mitochondrial biogenesis [BR:
sdn03029
]
Sden_1887
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Sden_1887
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Sden_1887
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sden_1887
Prokaryotic type
Other AARSs
Sden_1887
Mitochondrial biogenesis [BR:
sdn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Sden_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABE55170
UniProt:
Q12N06
LinkDB
All DBs
Position
complement(2213833..2215614)
Genome browser
AA seq
593 aa
AA seq
DB search
MRSHYCGDINRSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFDVA
SSLRGEFCVQVTGLVRARPDSQINSQMKTGEIEVLGKGLTIINASAPLPLSMDNHQNNSE
EQRLKYRYLDLRRPEMAERLIFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSEEVMVKTEEMMRGLFLELLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADL
LKEVEFAVFNGPANDEEGRVAALRIPNGATLSRKQIDDYTKFVGIYGAKGLAWMKINDLA
AGMEGIQSPVLKFLTESIVNDIISRTGAQTGDIILFGADKANVVAEAMGALRLKAGEDFE
LLEGQWRPLWVIDFPMFEKINGGFHAVHHPFTAPRGVTAAELEANPANRVSDAYDMVLNG
CELGGGSVRIHNAEMQSAVFRILGIEEEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIM
LMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLTELGIKVVEKVKVADGE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacatcaataggtctcatctgggtcaagaagttacctta
gtgggttgggttaaccgcagccgtgacttaggcggtgtggttttcttagatttacgcgac
agagaaggcttagtgcaagtcgtctatgatccagatctaaaagatgtcttcgatgtggcc
agcagcttgcgcggtgagttttgtgttcaagttacaggtttagttcgcgcccgtcccgat
agccaaatcaacagtcaaatgaaaaccggtgaaattgaagtgttaggcaaaggcttaacc
ataatcaatgcgtcagcgccattgccattaagcatggacaatcaccagaataacagcgaa
gagcaacgccttaagtaccgttatttagacttacgtcgcccagaaatggccgaacgctta
attttccgcgctaaagtcaccagtgcagtgcgtcgtttcctcgacagtaacggcttcttg
gacatagaaaccccgattttaactaaggcaaccccagagggggcccgcgactatttagtg
ccgagccgcacctacaagggtcagttctttgccttacctcagtcgccacagctgttcaaa
cagttgttaatgatgtcaggctttgatcgttattaccaaatcgttaagtgcttccgtgat
gaagacttacgtgccgaccgtcaaccagaatttacccaaatcgatatcgaaacctcgttt
atgacctctgaagaagtgatggtcaaaaccgaagaaatgatgcgtggtttgttccttgag
ctattaaatgtggacctcggcgagttccctcgcatgacctataacgaagccatgcggcgt
tttggttcagacaagccagatttacgtaacccacttgagttagtcgatgtggctgactta
ctaaaagaggtggagtttgcggtattcaatggcccagctaacgatgaagaaggccgggtt
gccgcgctgcgcattccaaatggggccacgctttcacgtaagcaaattgatgattacact
aagtttgttggcatttatggcgccaaaggcctagcatggatgaaaataaacgatttagcc
gcaggcatggaaggcattcaatcccctgtgcttaagttcttaactgaatcaatcgttaat
gacatcatcagccgcactggcgcacaaactggcgacatcatcttatttggtgccgataaa
gccaacgttgttgccgaagccatgggcgcattgcgcttaaaagccggtgaagactttgaa
ttactcgaaggtcagtggcgtccgctttgggtcatcgacttccccatgtttgaaaaaatt
aacggcggtttccacgcggttcaccatccgtttactgcccctcgcggcgtgacggctgca
gaacttgaagccaacccagctaaccgtgtatccgatgcctatgacatggtattaaacggc
tgcgaattaggcggcggttcggtgcgtattcataacgctgaaatgcaaagtgccgtgttc
cgtattctgggcatcgaagaagaggaagccaaagagaagtttggtttcttattggaagcc
ctacgttatggcacgccgccacacgcaggtttagcctttggtcttgatcgcatcataatg
ctaatgacgggcgccacctcaatccgcgatgtgatggccttccctaagaccaccacagct
gcttgtccattaactaatgcaccaggttttgctaacccagctcaattaactgagttaggt
atcaaggtggttgaaaaggtgaaagttgctgacggcgaataa
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