Shewanella denitrificans: Sden_1924
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Entry
Sden_1924 CDS
T00344
Name
(GenBank) Collagen triple helix repeat
Organism
sdn
Shewanella denitrificans
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
ABE55207
UniProt:
Q12MW9
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Position
complement(2279501..2280901)
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AA seq
466 aa
AA seq
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MKLKTLLIAPALCMMVTSAIASEFGAYYSFEGQGNGFKDISSNDNNGYFLNSAEGTYTMS
GRNGLALEKDVLVVGTMPSHKKDMPITVSAWVRTSELQGVHPLVSKLDAIGNQGFSITVS
PQGLTFSLMDQALAGITVSTSGLPSLTSWTHVAVTYSGSGKASGVKVYVNGLEQTTTTLA
DNLALQTNTFAPLYIGGSIREPAPFPGAIDEVLIAPTAYSIGQIGCLATFGSDCASAIGL
GPRGEQGAQGPKGPAGIMGEAGPRGLQGATGDQGAMGPAGEAGPQGPRGDIGPIGNQGVK
GANGANGSDGVNGLAGATGAKGPQGRVGATGPQGDIGATGPSGPKGVTGLRGEQGDTGPR
GDAGAQGPVGARGSTGATGANGRRGIDGVIGDQGNPGAQGSPGSKGDNSTVRGDTGAKGL
AATEFYSSADLHSLRTQLKGDTGAVGPTGPQGFVGRCICSGRRCNL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaaaacactactaatagcccctgcattgtgcatgatggtgacaagcgccatc
gccagtgaatttggcgcctattactccttcgaaggccaaggcaatggctttaaagatatt
tcaagcaatgataataatggctactttctaaactcagccgaaggcacttataccatgagt
ggccgtaatggcctggcattagagaaggatgtattggttgtgggcaccatgccatcccat
aagaaagacatgccgattaccgtgtccgcctgggttcgtacctcagaacttcaaggggta
cacccgttagtgtccaagctagatgccatcggcaaccagggctttagcatcacggtttcc
ccccaaggattaaccttcagcttaatggatcaggcattggcggggatcacggtatccacc
tcagggctaccgtcattaacaagctggacccatgtggcagtgacctacagtggcagtggc
aaggcctctggcgttaaagtctatgtgaacggtttggagcaaaccacaaccacgcttgct
gataatttggccttgcaaaccaatacctttgccccgctttatattggcggctctatcaga
gagccggcaccgtttcccggtgcaatcgatgaagtgttaattgcccctacggcttattca
attggtcaaattggctgtttggccacttttggcagtgattgtgcttcggccatcggccta
ggccctcgtggtgagcaaggggcacagggacctaaagggcctgcgggcattatgggagaa
gcgggtcctcgcggcttacaaggcgcaacgggagatcaaggcgccatggggccagctgga
gaagctggccctcaagggccccgtggggatattggcccgataggcaaccaaggtgtcaaa
ggcgccaatggtgccaatggcagcgatggtgttaatggcctagccggtgctactggggcg
aaaggccctcaaggccgcgtgggcgcgactggcccacagggtgacataggcgcaaccggc
cctagtggtcctaaaggggtgacaggcctaagaggggagcaaggtgatactggtcctcga
ggggatgctggtgctcaaggcccagtcggtgcacgaggcagcacgggtgctaccggtgcg
aatggccgcagaggcatagatggggttataggcgatcaaggcaatcctggcgcgcaaggt
agtccagggtcaaaaggcgataactcgactgtaagaggtgatactggagctaagggctta
gcggcgacggagttttattctagcgcagatctgcatagcttgcgaactcaactgaaaggt
gatactggggctgtaggaccgacaggcccgcaaggctttgtggggcgatgcatctgctca
ggccgtcgctgcaatctttaa
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