KEGG   Shewanella denitrificans: Sden_1952
Entry
Sden_1952         CDS       T00344                                 
Name
(GenBank) ribonucleoside-diphosphate reductase class Ia alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sdn  Shewanella denitrificans
Pathway
sdn00230  Purine metabolism
sdn00240  Pyrimidine metabolism
sdn01100  Metabolic pathways
sdn01232  Nucleotide metabolism
Module
sdn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sdn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Sden_1952
   00240 Pyrimidine metabolism
    Sden_1952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdn03400]
    Sden_1952
Enzymes [BR:sdn01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Sden_1952
DNA repair and recombination proteins [BR:sdn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Sden_1952
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-ProteinID: ABE55235
UniProt: Q12MU1
LinkDB
Position
2314632..2316920
AA seq 762 aa
MNTNMTVTKRSGERESIDLDKIHRVITWSTKGLKNVSVSEVELRSHLQFFDGIPTEAIHE
TIIKAAADLISPDSPDYQFVAARLAVFHLRKKAYGQFEPPSLVDHVTRLVELGKYDKNIL
TDYTREELEVMDTYIDHWRDMNFSYAAVKQLEGKYLVQNRVTHEVYESAQFLYILVAACL
FARYPAETRLKYIKDFYDATSNFKISLPTPIMAGVRTPTRQFSSCVLIECDDSLDSINAT
ASSIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCLPFYKYFQTAVKSCSQGGVRGG
AATLFYPIWHLEVESLLVLKNNRGVDDNRVRHLDYGVQLNKLMYQRLIKGQDISLFSPSD
VPGMYDAFFADQVEFERLYLQYEQDTRIRRKTLKAVELFSLMMQERASTGRIYIQNVDHC
NTHSPFDPSVAPIKQSNLCLEIALPTKPLKNIDDPEGEIALCTLSALNLGAIKDLSELEP
LADLAVRALDNLLDYQDYPIISAQLGSMNRRTLGIGVINFANYLAKNGKKYSDGSANNLT
HRTFEAIQFYLLKASMNLAKEQGACPLFNETTYSKGILPIDTYKRDLDAICSEPLHMDWE
ALRKDILEHGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKASKDGQLKQVVPDFD
ELRDSYELLWNMPNNDGYLQLVGIMQKFVDQAISANTNYDPSRFEGRKVPMQTLLKDLLG
AYKLGVKTLYYHNTRDGASDQFDEITAVIEEDDDCAGGACKI
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgaataccaatatgacagtcaccaagcgaagtggcgaacgtgaatccatcgatttggat
aaaatccaccgcgtaattacttggtcaaccaagggtttaaaaaacgtctcggtttcagaa
gtcgaactgagatcccacttgcagttttttgacggcattccaacagaagccattcatgaa
actatcattaaagctgcggccgatcttatctctccagattcgcctgattaccagtttgta
gcggcccgtttagccgtgttccatttgcgtaaaaaagcctatggccaatttgagccacca
agcctggttgatcacgttacccgcttggttgagcttggcaaatacgacaagaatatcctc
accgactacacccgtgaagaacttgaagtgatggatacttatatcgatcactggcgcgac
atgaacttctcctatgctgcggttaagcagttagaaggcaagtatctagtgcaaaatcgt
gtcacccatgaagtgtatgagagcgctcagttcctctacatcttagtggcggcctgtttg
tttgctcgctatccggctgaaacacgccttaagtacatcaaagacttctatgatgcgacc
tcaaactttaagatctccttgccgacacctatcatggcaggcgtgcgcaccccgacacgt
caatttagctcatgtgtgttaatcgagtgtgatgacagcctagattcaatcaatgccacg
gcttcttctattgtaaaatacgttagccagcgcgctggcattggcattaacgccggccgt
attcgcgccctaggcagcccaattcgcggtggtgaagctttccacacaggttgcttaccc
ttctataagtattttcaaactgcggttaagtcgtgctctcaaggcggcgtacgtggcggt
gctgccaccctcttctacccaatatggcatttagaagttgaatctctgctggtacttaag
aataaccgcggcgtcgatgataaccgtgtgcgtcacttagattatggcgtgcagttaaac
aagttgatgtatcagcgtttgattaaaggtcaagacatcagcctatttagcccatctgat
gtaccaggcatgtatgatgcattcttcgccgaccaagtggaatttgagcgcctgtattta
cagtatgaacaagacactcgtattcgccgcaagaccttaaaggctgttgaattattttca
ctcatgatgcaagaacgtgcttcaacgggccgtatttacattcagaacgtggatcactgc
aacactcacagcccgtttgacccaagcgtagcgccgattaaacaatctaacctttgttta
gaaatcgccttgccgaccaaaccgcttaaaaatattgacgaccctgaaggtgaaatcgca
ctctgtacgctttcagctctaaacttaggtgcaatcaaagacttaagtgagctagaaccc
ttagcggatttagcggttcgcgcccttgataacctgttagattatcaagattacccgatt
atttcggctcagctgggttcgatgaatcgccgtactttaggcataggcgtgattaacttc
gccaactacttggccaaaaatggcaaaaagtactcggatggttcagctaacaatttaact
cacaggacattcgaagccatacagttctatctgttaaaagcctcgatgaacttggctaaa
gagcaaggggcctgtccgttatttaacgagaccacttattcaaaaggcatcttgcccatt
gacacttataagcgggatttagacgccatatgcagtgagcctttgcacatggattgggaa
gcgctgcgtaaagacatactagaacacggcttacgtaactcgaccttgtctgcactcatg
ccgtctgagacatcatcgcaaatctctaacgccactaacggtatcgagccacctcgtgga
ctcatcagcgttaaggccagtaaagatggtcagttgaagcaagtggtaccggattttgat
gaactgcgtgacagctatgaattgttatggaacatgccaaacaatgatggttacttgcag
ctggtgggtatcatgcaaaagtttgtcgaccaagccatttcggccaacactaactatgac
ccaagccgatttgaaggccgtaaagtgccgatgcagaccttgcttaaagacttgctcggc
gcctacaaacttggggtgaagacactgtattaccataacactcgcgatggcgcgtccgat
cagtttgatgagatcaccgctgtgattgaagaagatgatgattgtgccggcggtgcatgt
aagatttaa

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