Shewanella denitrificans: Sden_2028
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Entry
Sden_2028 CDS
T00344
Name
(GenBank) alpha amylase, catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00052
Galactose metabolism
sdn00500
Starch and sucrose metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Sden_2028
00500 Starch and sucrose metabolism
Sden_2028
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Sden_2028
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Motif
Pfam:
Alpha-amylase
Malt_amylase_C
SusG_C
Alpha-amylase_C_2
Motif
Other DBs
NCBI-ProteinID:
ABE55311
UniProt:
Q12ML5
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Position
complement(2404314..2405987)
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AA seq
557 aa
AA seq
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MGQLSWWRGGVIYQVYPRSLMDANDDGIGDLQGIIQKLDYIASLNVDAIWISPFFKSPMK
DFGYDISDYRAIDPLFGTMEDFDSLIETAHGLGLKIIIDQVLSHTSDEHAWFEQSRQNRT
NDKADWYVWADPKEDGTAPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDLNFHCEAAR
EAVLSNVEFWLKKGVDGFRLDAITFCYHDEQLRDNPAKPKDKRQGRGFSEDNPYAYQYHY
YNNTRPQTLSFIEQLRALIDRYPGTVTLGEVSSEDSLATMAEYTRGDKRLHMAYSFELLT
KDYSAGYIRQTVEELEVSIGDGWPCWAIGNHDVERVASRWSQGEAKLGQVKMLNAMLGSL
RGSICSYQGEELGLTEADIPFEQLQDPFGLAFWPMFKGRDGCRTPMPWTDTKTDSATHSG
FSKATPWLPVAEAHLPLAVEKQEADSDSALHSYRQFMQWRKQQVALLDGSIAFLDIKAPM
LAFVRQHQQQTLLVMFNLSPEPQSISLAELMLVNPQLAGVKGVKSQSEHGLSMAKQDETG
RELTFEGFDVFYAQVEC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggggcagttaagctggtggcgtggcggagtaatttatcaggtatacccacgtagcctc
atggacgctaacgacgatggcattggcgatcttcaaggcataattcaaaagctggattat
attgcaagccttaatgtagatgccatatggatctcaccttttttcaagtcgccaatgaaa
gattttggttatgacatcagtgattatcgcgccatagacccactatttggcaccatggag
gatttcgatagcttaattgaaactgcccatggattaggccttaaaataattatagatcag
gtgctcagtcatacttctgatgaacatgcctggttcgaacagagccgtcaaaaccggact
aacgataaagccgactggtacgtgtgggctgatcctaaagaagatggcacagcccctaat
aattggctggcaatttttggaggctgcgcctgggagtgggagccaagacggcaacaatac
tatttgcataacttcttaaagagccaacccgatctgaactttcattgtgaggccgcgcgg
gaagcggtattgagtaatgtagagttttggcttaaaaaaggcgtcgatggtttcaggcta
gatgccattaccttctgttatcacgatgagcaattgcgggataatcctgctaagcccaaa
gataaacgacaaggccgcggcttcagtgaagacaacccctatgcttatcaatatcactat
tacaacaatactcggccgcaaaccttaagctttatcgagcagctgcgtgccttgatagac
agatatccaggcacagtcaccttaggtgaagtgtcatcggaagattcattagccaccatg
gctgaatacactcgcggtgacaagcgcttgcacatggcatacagttttgaattgttgacc
aaagattacagcgccgggtacatccgtcaaaccgtcgaagaactggaagtcagcataggt
gacggatggccttgttgggccataggcaatcatgacgttgaacgggtggcaagccgctgg
agtcagggcgaagctaagcttgggcaagttaaaatgctcaatgccatgttgggctccctt
agaggcagtatttgcagctaccaaggtgaggagctgggattaaccgaagcagatatcccc
ttcgagcaactgcaagatccttttggattagcattttggcccatgttcaagggccgtgat
ggttgccgcacccctatgccttggacagacactaagactgacagcgcaacacattcaggc
tttagcaaggcaacaccttggcttcctgtggctgaggctcatctgcccttggcggttgaa
aaacaagaagctgactcagactcagcgctgcacagttatcgtcaatttatgcagtggcgc
aagcaacaagtggcactccttgatggcagtattgcatttttggacatcaaagcgcctatg
cttgcatttgtgcgccagcatcagcagcagaccttgctagtcatgtttaatttaagccct
gagccgcagtcaatatctttggcggaattgatgctggttaacccacaacttgctggcgtt
aagggagttaaatcccaatctgagcatggccttagcatggcgaaacaggatgagacgggg
cgagagctaacttttgaaggtttcgatgtattttatgctcaagtcgagtgctaa
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