Shewanella denitrificans: Sden_2056
Help
Entry
Sden_2056 CDS
T00344
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00450
Selenocompound metabolism
sdn00970
Aminoacyl-tRNA biosynthesis
sdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Sden_2056
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_2056
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_2056
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2056
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Sden_2056
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Sden_2056
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sden_2056
Prokaryotic type
Other AARSs
Sden_2056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Adenyl_transf
Motif
Other DBs
NCBI-ProteinID:
ABE55338
UniProt:
Q12MI8
LinkDB
All DBs
Position
2440103..2442172
Genome browser
AA seq
689 aa
AA seq
DB search
MTQSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKMRGHECHYICADDAHGTPIM
LKAQQLGIAPEAMIAQVQIEHEQDFADFNVAFDNFHSTHSEENRELASDIYIKLRDAGHI
KTKTISQLYDPEKSMFLPDRFVKGTCPKCKSDDQYGDNCDSCGATYSTTDLINPRSAVSG
ATPVMKDTEHFFFDLPAFEGMLKEWIHSGSLQSEMANKLNEWFEQGLQQWDISRDAPYFG
FEIPDAPGKYFYVWLDAPIGYMGSFKNFCAKRGDINFDDFWAKDSTAEVYHFIGKDIVYF
HSLFWPAMLEGAGLRKPTSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYA
AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLANVTDNSLAESF
IAKQEVIAEFYEAREYGKAMREIMAMADIANGFVAEQAPWQLVKDDDKQAQAHEVCSIAL
NLFRILTTYLKPVLPRLSQDVEAFMQLELTWDNLAKDMTAHEIAPFKAMMQRVDLDKVAA
MVDASKDNLQPTEAPKADKKADKKVEKKATTGDPLTDDPISDEISFEDFAKLDLRIALIA
KAEHVADADKLLKLQLDLGGVTKQVFAGIKSAYAPEDLEGKLTVMVANLAPRKMRFGMSE
GMVLAAGPGGDELWILEPHQGAKPGMRVK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgacacaatcacaacgtaaaatactggtcaccagtgcccttccctatgcaaatggcccc
attcacctagggcatatgttggaatatatccaaacggatatctggtctcgcttccaaaaa
atgcgtggccatgagtgtcactacatttgcgccgacgatgcccacggcacgcctatcatg
cttaaagcacagcaattaggcatagccccagaggcgatgatcgcccaagttcagattgag
catgaacaagattttgctgacttcaacgtggcttttgataattttcacagcacccacagc
gaagaaaaccgcgagcttgccagtgacatctacattaaattgcgtgatgccggccacatt
aagactaagacaatttctcagctttatgacccagaaaagtccatgttcctgccagaccgt
ttcgttaagggcacctgcccaaaatgtaagtctgacgatcaatacggcgacaactgtgac
agctgcggcgcaacctacagcaccacagatttaatcaatccacgttctgccgtgtcgggc
gccaccccagtcatgaaagacactgagcacttcttcttcgacttgcccgcctttgagggc
atgctaaaagagtggatccactcaggctctttgcagtcagaaatggccaacaagctcaac
gaatggttcgaacaaggcctgcagcagtgggatatctcccgcgatgcgccctactttggt
tttgaaatccccgatgcgcctggtaagtacttctatgtatggctggatgcacctatcggc
tacatgggctcattcaagaatttctgcgctaagcgcggtgacatcaattttgatgatttt
tgggccaaagactccaccgccgaggtgtaccactttatcgggaaagacatcgtctacttc
cacagcctattttggccagccatgttagaaggcgcaggccttcgtaagcctacaagtgtt
tacgcccacggttatgtgacggtcaatggcgcgaagatgtctaaatctaagggcaccttt
attaaggcgcgcacctatttagaccatttagaccctgaatacttgcgctactactacgcc
gcaaagctcagtagtcgcatcgatgacttagatttaaaccttgaagacttcgcccagcgg
gtcaactcagatttagtcggtaagctagtgaacttagcgtcccgcaccgcaggctttatc
agcaagcgtttcgatggcaagttagctaacgttaccgacaacagcctggctgaaagcttt
attgctaagcaagaggtgattgctgaattttacgaagcccgtgaatacggcaaagccatg
cgtgaaatcatggccatggccgatatcgctaacggctttgtggcagaacaagccccgtgg
cagctagttaaagatgatgacaagcaagcacaggcccatgaagtctgctctattgcgctg
aatttattccgcattttgactacgtacctaaagcctgtactgccacgtttaagtcaagat
gttgaagcctttatgcagcttgagctcacttgggataatttggctaaagacatgacagcg
catgaaattgcgccgtttaaagccatgatgcagcgcgtcgatttagacaaggtagccgcc
atggtggatgcctctaaagacaacttacagcccactgaagcgcctaaagccgacaagaag
gctgacaagaaagtagagaaaaaagcaacgactggggatccgttaactgacgaccctatc
agtgatgaaatcagctttgaagactttgctaagcttgatttgcgtattgcgctgattgcc
aaagccgagcacgtcgccgatgccgacaagctgcttaaactgcaattagatttaggcggc
gtcaccaagcaagtgttcgctggcattaagtctgcttacgcaccagaagatttagaaggc
aagctcactgtgatggttgccaaccttgcaccgcgcaagatgcgctttggcatgtctgaa
ggcatggtactggccgcaggcccaggtggcgacgagctatggattttagagcctcaccaa
ggtgccaaacccggcatgcgcgtgaaatag
DBGET
integrated database retrieval system
