Shewanella denitrificans: Sden_2080
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Entry
Sden_2080 CDS
T00344
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdn03000
]
Sden_2080
Transcription factors [BR:
sdn03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sden_2080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_29
HTH_24
Penicillinase_R
MarR
DUF3640
Motif
Other DBs
NCBI-ProteinID:
ABE55362
UniProt:
Q12MG4
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Position
2468490..2469350
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AA seq
286 aa
AA seq
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MLMNTLEKVQNSLNQFSKSERKVAEVILSSPQTAIHSSIATLAKMADVSEPTVNRFCRRL
DTKGFPDFKLHLAQSLANGTPYVSRHVEEDDSTDSYTTKIFESSMASLDTARQSLDTAAI
HKAVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINCNEGDV
VVLISHTGRTKSLIEIARIARENGAAVIAITARNSPLSLECTLPVTMEVPEDTDMYLPMA
SRLAQLVTIDVLATGFTLRRGPRFRENLKRVKEVLKESRVNKDSIL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgaatacccttgaaaaggttcaaaacagccttaaccaatttagtaagtcagaa
cgaaaagtcgcagaagtgatcctttcgtcaccgcaaaccgctatccattcaagcatagca
actttagccaaaatggctgatgtgagtgagccgacggtgaaccgtttctgtcgccgtcta
gacactaaaggtttccctgattttaaactccatttggctcaaagcctagccaatggcaca
ccttatgtgagccgtcacgtagaggaagacgacagcactgattcctacaccactaagatt
ttcgaatcttctatggcgtcactggatacggcccgtcaaagcttagacacggcggctatc
cacaaggcagtagacatactgactcaagcgaaaaccatctccttcttcggcttgggtgcc
tcggcctctgtcgcccacgacgcgcagaataaatttttccgttttaacgtgcctgtgatt
tgtttcgatgacgtgctaatgcagcgcatgagctgcattaattgcaatgaaggcgatgtg
gttgtgctgatttctcatacgggacggactaaatccttaattgaaatcgcccgcatagca
agggaaaatggcgcggctgtgattgccataactgccagaaactccccgctgtcgctggaa
tgtaccttacctgtgaccatggaagtacctgaagataccgacatgtacttgccgatggca
tcccgcttggcgcagttggtcaccatagatgtgctcgccaccggatttaccttaagacgc
ggcccaagatttagagaaaacttgaagcgcgtgaaggaagtattaaaagaatcacgggtg
aataaagattctattctctag
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