Shewanella denitrificans: Sden_2198
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Entry
Sden_2198 CDS
T00344
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00912
tetraacyldisaccharide 4'-kinase [EC:
2.7.1.130
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00540
Lipopolysaccharide biosynthesis
sdn01100
Metabolic pathways
Module
sdn_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sden_2198
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdn01005
]
Sden_2198
Enzymes [BR:
sdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.130 tetraacyldisaccharide 4'-kinase
Sden_2198
Lipopolysaccharide biosynthesis proteins [BR:
sdn01005
]
Lipid A
Sden_2198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxK
cobW
MobB
FecR_C
Glyco_trans_4_2
Motif
Other DBs
NCBI-ProteinID:
ABE55479
UniProt:
Q12M47
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All DBs
Position
complement(2608499..2609494)
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AA seq
331 aa
AA seq
DB search
MQRWINNIWYGSNPIKWLLVPLSGLFWLISSLRRKKFAGSPSASEALGVPVIIVGNITVG
GSGKTPMVIYLIELLRRQGYRPGVISRGYGVKIDGVKLVEAQASAVDVGDEPAMIVARTQ
VPMAVGPDRLAAVSLLQRHYDIDVIISDDGLQHYKLTRDIELVIIDGARRFGNGYLLPAG
PLREGLWRLKTIDWLINNGGKAQDNEVLMQLEPKPLLKVKSSQPGLESLDKALPVVAMAG
IGNPARFFDSLSGQGYQLKHTLAFDDHQAFDAQALIALAGDLPLIMTEKDAIKCRDFAQD
NWWYLPVNARLNADFDKALLARLAPLVQIKP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctggataaataatatttggtatggctcaaatcccattaaatggctactagtg
ccgttatctggcttattttggttgatttcgagtctgagacggaaaaagtttgctggcagc
ccatcggcatcagaagccttaggggtgccagttatcatagtcggtaacattaccgtgggt
ggcagtggcaaaacacctatggtcatctatctcattgaactgcttcggcgccaaggctat
cgcccaggggtgattagccgcggttatggggtaaaaatagacggggttaagctggttgaa
gcacaggcgagcgctgtggatgtcggtgatgagcccgccatgatagtggcccgcactcaa
gtgcccatggctgtgggacctgacaggcttgccgcggtgagcttattgcaacgccattat
gatatcgatgtcattatcagcgatgatggcctgcagcattacaaattaactcgagatata
gagcttgttatcatagatggcgctcggcgttttggtaatggttatctgttacccgcaggg
ccattacgggaaggattatggcggttaaagaccatagattggctgattaataatgggggg
aaggcccaagacaatgaggtgttgatgcagctggaacctaagcccttgttgaaggttaaa
tcgagtcagcctggattggaaagcctagataaagcactgcccgtggtggctatggccggc
ataggtaatccagcgcgattttttgactcacttagcggccaagggtatcagctaaagcac
accttagcatttgatgatcatcaggcattcgatgctcaagcactcattgcattggcgggg
gacttgccgcttattatgacggaaaaagatgccatcaagtgccgcgactttgctcaagat
aattggtggtatttaccggttaatgcgagacttaacgcagattttgataaggcattgttg
gcccgtttagcgccattagtgcagataaaaccataa
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