Shewanella denitrificans: Sden_2229
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Entry
Sden_2229 CDS
T00344
Name
(GenBank) porin, Gram-negative type
KO
K16076
outer membrane porin protein LC
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_2229
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_2229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
ABE55509
UniProt:
Q12M17
LinkDB
All DBs
Position
complement(2650060..2651208)
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AA seq
382 aa
AA seq
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MKQAYLTALISALMASQAVAIEIYKDDTNKVNIGGWIDVRAIDTQDVSEIANGASRINFA
FERQLKNDWHAFAKLEWGVDPVGTGRVIYNGDESFGSSQDDFIYNRLGYAGLSHADYGSL
TMGKQWGAWYDVVCYTNLAFFTDGNASGTYTYNKFDGAVNGTGRGDKIVQYRNRLGDVSF
AAQVQLKSEKITLDKANDPLEVSRLDYSNTAGLGVTYQVNDQWLMTLGGNYGQVEGNRFD
GTSFDETDYIYGFGFAYGWWDVAGFYAAANFNWNQFHDTDNLNRMIPESKGVESIIAYQY
DNGIRFILTYNLLEASAEYAKAYQGDVFKRQSMVAGVHYLFDTSTVVFAEFSKNLGDFNG
QRAAAMELSEDDALLIGLRYSL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagcatatttaacagcactcatttcagcattaatggcgtctcaagccgtcgcc
attgagatatacaaagacgataccaataaggtgaacattggcggctggattgacgtgcgt
gcaatagacactcaagacgttagcgaaatcgcaaacggcgcttcgagaattaattttgcg
ttcgagcgccagttaaaaaatgactggcacgcctttgccaaactcgaatggggtgttgac
cctgtgggcacaggtcgggtgatttacaacggcgatgaaagctttggatcctctcaagat
gacttcatctataaccgcttgggttatgccgggctttcgcatgcggattatggcagttta
actatgggtaagcagtggggagcttggtacgatgtcgtgtgctacaccaacttagccttc
tttaccgatggtaatgcatcaggcacttacacctataacaagtttgatggtgcggtaaat
ggcactggccgcggtgataagatagtgcaataccgtaatcgcttaggggatgtgtctttt
gcggcgcaagttcagctaaaaagcgaaaaaatcaccttagataaagcgaatgaccccctt
gaagtgagtcgccttgattattcgaacaccgcaggtcttggggtgacatatcaagtcaat
gatcaatggcttatgaccttaggtggcaactatggtcaagtggaaggcaatcgctttgat
ggcacaagctttgatgaaacagattatatctatggctttggttttgcttacggttggtgg
gatgtggccggtttttacgccgcggctaatttcaattggaaccagttccatgataccgat
aacctaaaccgaatgatcccagaatcaaaaggcgtcgagtccattattgcttaccaatat
gacaatggcattcgtttcatcttgacctataacttactcgaagccagtgcagagtatgcc
aaggcttaccaaggagatgtgtttaagcgccaatctatggtcgccggcgtgcattacctg
tttgataccagcactgtggtgtttgctgagttttctaaaaacttaggcgattttaatggc
caaagagcagccgcaatggaattgtcagaagatgatgccttgctcattggcctgcgttat
tcgctgtaa
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