Shewanella denitrificans: Sden_2248
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Entry
Sden_2248 CDS
T00344
Name
(GenBank) 3-methylcrotonoyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00280
Valine, leucine and isoleucine degradation
sdn01100
Metabolic pathways
Module
sdn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sden_2248
Enzymes [BR:
sdn01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Sden_2248
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
HlyD_3
BT_MCC_alpha
HlyD_D23
GARS_A
GCV_H
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ABE55528
UniProt:
Q12LZ8
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Position
2669619..2671712
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AA seq
697 aa
AA seq
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MFTKLLIANRGEIACRIIKTAKSMGVRTIALYSDADKDARHVAMADESFYLGGSAPADSY
LKADLIIDIAKKAGAGAIHPGYGFLSENAEFARKCEQNGIAFVGPGSEAIEAMGSKSAAK
EIMGKANVPLVPGYHGDDQTDDNLVQQAKLIGFPLLIKAAYGGGGKGMRIVENEGEILAA
VKSARREATSSFGNDKLLMERYLRQPRHVEVQVFADTHGNAIYLSDRDCSIQRRHQKVVE
EAPAPGLSDALRAQMGQAAVAAAKAIDYVGAGTVEFLLDTLATDESSSFYFMEMNTRLQV
EHPVTEMVTGQDLVKWQLMVASGDELPLTQQEVRIHGHSFEVRIYAEDPQNDFLPASGKL
NFLREPEQNQHVRIDSGIRENDVISNFYDPMIAKLIVWDDSRPRALQRLVHALESYQISG
LRHNIEFLANIAEHPAFAAADFSTDFIERYGDALIGSASSEAQTALALAGLYQVLSRKQA
AKALAINSQDPHSPWGQMSGFRLNSDSIHHVALLSDETKDPDSKESLQPLHNLLLVAQGD
GYQLTLVNEYTLDEQVLNLSGELRDDLLLAEINGHKSKIPVSHQGDDFTLFLSSGSYHFK
AVLAQIAEEQVNSADKLKAPMNGTVVTHLVDVGASVTAGQGLLVMEAMKMEYTIEAPFDG
TVTAFYFQSGELVTDGAQLLEVEPLAVDIVNANNKEA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaagttacttatcgccaaccgcggtgaaatcgcctgtcgcatcatcaaaacc
gcaaaaagtatgggtgtgcgcaccattgccttgtattcggatgccgacaaagacgctcgt
cacgtggccatggccgatgaatctttctatttaggcggcagtgcaccggcagattcctat
ttaaaagccgatcttattatcgacatcgccaagaaagccggcgccggtgccattcaccca
ggctatggtttcttgtctgaaaacgccgaatttgcccgcaagtgtgagcaaaatggcatt
gccttcgtgggccctggcagtgaagccatcgaagccatgggcagtaaaagcgcagcaaaa
gaaatcatgggtaaggccaatgtgccgttagtgccaggctaccatggcgatgaccaaacc
gatgacaacctagtacaacaagccaaacttatcggctttccactgcttatcaaggcggcc
tacggcggcggcggtaaaggcatgcgtatcgttgaaaatgaaggtgaaatattagcggcg
gtgaaatctgcccgccgtgaagccacctcttcatttggtaacgacaagctgttaatggag
cgctacctgcgccaacctaggcacgttgaagtgcaagtgtttgccgacacccatggcaac
gcgatttacctgtcagatcgagactgctctattcagcgccgccatcaaaaagtggtggaa
gaagccccagcgccgggtttatccgacgcccttcgcgcacaaatgggtcaagccgcggtc
gccgcagctaaagccatagattatgtgggtgcgggcacagttgagtttttgctcgatacc
ctagccaccgatgagagcagcagcttctactttatggaaatgaacacccgcttacaggtt
gagcatccagtgacagaaatggttaccgggcaagacttagttaagtggcagctgatggtc
gccagtggcgatgaattacccctaacacagcaagaagtgcgcattcacggccactctttt
gaagtgcgtatttacgctgaagatccgcagaatgattttctgcccgccagcggcaaatta
aactttttgcgtgaacctgaacaaaaccagcatgtgcgtatagattcaggcatacgtgag
aacgatgtcatcagtaacttctatgaccccatgatagccaagctcatcgtatgggatgac
tcgcgcccccgcgccctgcagcgcctggtacatgcccttgagtcctatcagataagtggc
cttaggcacaacatagagttcttggccaatatcgccgagcaccccgcctttgccgccgcc
gactttagcacagactttatcgaacgctacggtgatgccctgattggcagcgcctccagc
gaagcccaaaccgcgttagcgttagcagggctgtatcaagtgctatcccgcaagcaagcg
gcaaaagccttggcaattaatagtcaagaccctcactctccttggggacaaatgagcggc
tttaggctcaatagcgacagcattcatcatgtggcgttattatctgatgaaaccaaagac
cctgacagcaaagaaagcctgcagccgctgcacaacttattgcttgtggctcaaggtgat
ggttatcaattaaccttagttaacgaatataccttagacgagcaagtgcttaacctcagt
ggcgagctaagggatgatttgttattggcggaaatcaacggccataagtctaaaatcccg
gtaagccatcaaggggatgatttcaccttgttcttgtcctctggaagctatcatttcaag
gcggtattggctcaaattgctgaagagcaagttaacagtgctgataaacttaaagcaccg
atgaatggcactgtagtgactcatttagtggatgttggcgctagcgttaccgctggccaa
ggcttattggtgatggaagccatgaagatggaatacaccatagaagcgccttttgatggc
acagtgacggcgttttatttccaaagcggcgagttagtcacagacggtgctcagctgctt
gaagtcgagccgctagctgtcgacatagtaaacgctaacaacaaggaggcctag
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