Shewanella denitrificans: Sden_2354
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Entry
Sden_2354 CDS
T00344
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00470
D-Amino acid metabolism
sdn00550
Peptidoglycan biosynthesis
sdn01100
Metabolic pathways
sdn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sden_2354
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sden_2354
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sden_2354
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_2354
Enzymes [BR:
sdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sden_2354
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Precursor biosynthesis
Amino acid ligase
Sden_2354
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
ABE55634
UniProt:
Q12LP2
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All DBs
Position
2800113..2801120
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AA seq
335 aa
AA seq
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MAKINVLLLCGGGGAEHDISLMSARFFETSLAKSDQFSVLTLTLDKQGRYHTQDGNLCSL
TNRREIRFEDPSIAPWAVDYVIPCIHGFPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGVPNTPYIFLHQFDQEAIAQTQAAFDTWGSVFIKAASQGSSVGCYKVDVR
DNIAKVLEEAFGYAPYVVVEKTIKARELEVAVYEYQGDIIATLPGEIICDTNKFYSFDEK
YAKDSKARTDVVASNLSPKLCLQIQDYAIKAFKGMKLRHLSRIDFFLTQDDEILLNEINT
FPGLTPISMFPKMLQNHGHDFTEYLSDVISQQLGR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctaagattaatgtgttgctactttgtggtggcggcggcgcagaacacgatatttca
ttgatgtcggcgcgtttttttgaaacttccttagccaaatctgaccaattttctgtgctt
acactcaccttagataaacagggtcgatatcacactcaagacggcaacttatgctccctc
accaatcgtcgcgagatccgcttcgaagaccccagtatcgcaccttgggcggtggattat
gttatcccctgtattcatggttttcccggtgaaactggcgacatacagtcttacttcaac
ttaattcaactgccctattttggctgtgagtctgaagcctcaagtaattgtttcaataag
atcaccgccaagatgtggttcagtgccttaggtgtacccaatactccgtacattttcttg
catcaatttgaccaagaagccattgcccaaacccaagccgccttcgacacttggggctca
gtgtttatcaaagccgcctctcaaggctcatctgtgggctgctacaaggtcgatgtacgt
gacaatatcgccaaggtactggaagaggccttcggctatgcgccttatgtggtggtagag
aagaccattaaagcccgtgagcttgaagtggcagtatatgaatatcagggcgacatcatc
gccaccttgcccggtgaaatcatctgtgacaccaataagttttatagtttcgatgaaaaa
tacgccaaagactccaaggcgcgcaccgatgtggtcgccagcaatttatcgccaaaatta
tgcctgcagatccaagactatgccatcaaggcatttaaaggcatgaagctgcgtcattta
tctcgcattgattttttcttaactcaagatgatgaaatattactaaatgaaatcaatacc
ttccctgggttaacgcctatatccatgttccctaagatgctgcaaaatcatggtcatgac
ttcactgaatacttgagcgatgtgataagccagcaactcggccgttaa
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