Shewanella denitrificans: Sden_2388
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Entry
Sden_2388 CDS
T00344
Name
(GenBank) dihydrouridine synthase, DuS
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2388
Transfer RNA biogenesis [BR:
sdn03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Sden_2388
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Gene cluster
GFIT
Motif
Pfam:
Dus
FMN_dh
Oxidored_FMN
BKACE
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
ABE55668
UniProt:
Q12LK8
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All DBs
Position
2840516..2841475
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AA seq
319 aa
AA seq
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MPVRVILAPMEGVVDPLMRDILSKINPYDLLVTEFVRVVDQLLPEKVFLKLCPELHQQGM
TANGTPVRVQLLGQEPQCMAENAVRAIELGSNGVDANFGCPAKMVNRSKGGAVLLQCPDK
VHDIVKAMRQAVSSEHPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKTDGYKP
PAYWEYITEVRQRLPIPVIANGEIWSAEDARRCIEVTGCDSVMIGRGAISLPNLADTIKT
GAAPYTWEQTLSLLMSYSELELNGRKSDYYPARIKQWFCYLNRQYPEADALFRELRVFKT
TDEIRAVLDKAHRALLATP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcgtgtaattttagcccctatggagggggttgttgaccctttgatgcgtgac
atcttgtcgaaaattaacccttatgatttattggttaccgaatttgtccgtgtggtggat
caactgctacctgaaaaagtgtttctcaagctgtgtcctgagttacatcagcaaggcatg
acagccaatggcaccccagttcgggtgcaactattaggtcaagagccacaatgcatggcc
gaaaatgccgttcgtgccattgaacttggctcaaatggtgtcgatgctaactttggctgc
ccagcaaaaatggtcaaccgcagtaaaggcggcgcggtattattgcaatgccctgataaa
gtgcacgacatagtcaaagccatgcgccaagctgtgtccagtgaacaccctgtcaccgcc
aaaattcgcttaggctatgaagataaatccttattcatggaaaacgcactggccgtttat
gaggctggcgctaccgaacttgctatacatgcccgcagtaaaactgatggctacaagcca
cctgcctattgggaatacatcacagaagtccgtcaacgcttgcctatacctgtgatagcc
aatggcgaaatttggagcgctgaagatgcgcggcgctgcattgaagtcacaggttgcgat
agcgtgatgattggccgcggcgccatctcactgcctaaccttgctgataccataaaaaca
ggcgctgcgccttacacttgggaacagaccttatccctattgatgagctattcagagctt
gagctcaatggccgcaaatcagattattatcccgcgcgaatcaaacagtggttttgctat
ttaaatcgtcaatatccagaggccgatgcactgtttcgtgaacttagggtatttaaaacc
acggatgaaatccgcgccgtgctcgataaggcacacagggcattgctcgccaccccatga
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