Shewanella denitrificans: Sden_2398
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Entry
Sden_2398 CDS
T00344
Name
(GenBank) SSU ribosomal protein S6P modification protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_2398
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
ribosomal protein modification factors
Sden_2398
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
LysX_preATP_grasp
Motif
Other DBs
NCBI-ProteinID:
ABE55678
UniProt:
Q12LJ8
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All DBs
Position
complement(2850398..2851321)
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AA seq
307 aa
AA seq
DB search
MMRENLAYLEPPLRIAILSQGPQLYSTKRLVEAAQARGHDVHIINPLKCYMNINMRQPSI
HIAGKELPQFDAVIPRIGASITFYGSAVLRQFEMMGVYTINDSVGISRSRDKLRSMQLLS
RKGIGLPITGFANKPSDIPDLIDMVGGAPLVVKLLEGTQGIGVVLAETRKAAESVLEAFM
GLKANIMVQEYIKEANGADIRCFVLGDKVIAAMKRQAKAGEFRSNLHRGGTATLVKLSPE
ERTTAIRAAKTMGLSLAGVDLLRSNHGPVVMEVNSSPGLEGIEAATQKDVANAIIEFIEK
NANKAKS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgaaaatttagcttacttggagcctccattgaggatcgctattctatctcaa
ggcccgcaactctattccactaaacgtctggtggaagccgcacaggcacggggtcatgat
gttcacattatcaatccgttaaagtgttacatgaacattaatatgcgccaacctagcatt
catattgccggtaaagaattgccgcaatttgatgccgtcattccgcgcattggagcctct
atcactttttacggttcggccgtgctacgccaatttgagatgatgggtgtgtataccatc
aatgattcagtgggcatttctcgctcacgagataagctgcgctcgatgcaactattgtcc
cgcaagggcataggcttacctatcacagggttcgccaataaacccagcgacatccccgat
cttatcgacatggttggcggcgcgcccttagtggttaaattgctcgaaggcacccaaggg
ataggggtggtgctcgctgaaacccgcaaggcggcagaaagcgtgcttgaagcctttatg
ggccttaaagccaatattatggtgcaggaatacataaaagaagccaatggtgccgatatc
cgctgctttgtcttaggcgataaggttatagcagccatgaaacgccaagctaaggccggt
gaatttagatctaatctgcaccgcggcggcactgcgaccttagtaaaattatccccagag
gagcgcaccacagcgattcgtgcggctaaaaccatggggctaagtttggctggggttgat
ttattacgctcaaaccatggccctgtggtgatggaggtgaactcatctccaggtcttgaa
gggattgaagcggcaacgcaaaaagatgtggccaatgccattatcgaatttatcgaaaaa
aatgctaataaagccaagagctag
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