Shewanella denitrificans: Sden_2404
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Entry
Sden_2404 CDS
T00344
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_2404
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_2404
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABE55684
UniProt:
Q12LJ2
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Position
2858561..2861179
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AA seq
872 aa
AA seq
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MQTNSILAKAVRFALIGGAATAALSASVATAADDQAKVERIEVTGSRIKRTDMEGSSPVT
TIDASAIEKTGELSMADVLRRSNLNTFGSTSENSGSAQQSQATINLRGAGSDRTLVLLNG
KRMPGSPTLGGTAVNLNTIPTAAIERIEVLTDGASAVYGSDAVAGVVNIITKKNFDGVEV
STTATDPVQGGGEEWKTHIVGGLTGDKGSMTFSFEHLNREIIYQRDRWFTSSSNVLAPKF
DDATGVSKYARNFLDGKTGQFSPMAACNNPKMVGAGHVYDAGGGDRVCGYDYTSEAADHA
SRTYTAGYVNSEYELSDEVVFQGQGLFSRNETFGRYAPAAGWFNVAANQLDIQNFDAAGN
LTGVSKNPNAGKAYYRFTDVGTRDGNTTDYSTDIQLALVGSHDDFGWDVTYHYNLAENTN
SGTGYVHRPTVEQYVKDGIFNFGPEGNSQSVIADIAHNTLKQDIMKFQSINAGLNFEYLE
LPAGAVSWYLGTEASQYKYDAKVDAQTAAGDVIGSSGNGSQGDRDVYAVFAESIVPVSED
VELNFAYRYDKYSDFGSATTPKVAIRYQALEDVVVRASWGQGFRAPSLSDLLAADALSAD
MATDYSYCDVLGTAVADCKAKQYDVTRQANSELEPETSDFYNLGVIWDITDNLSTKVEYY
NLSIDNVITFVSLDSLLKEEQKVGYGNLSRGEIKRVNNNPNGKLLSATTPKANGTGFDTT
GIDFNITYSGFETAIGEFGTSYDLTYVLSYDDEEYFDGPVNDKIGRNGKPEIRFTWVLDW
SYGDHSASLLTQYIDGQSEKTNPTDFSQVGNLSSQTTFDVSYGYHTSWDGKFGLGIRNLT
NQDPVLDSDLEYDSSLYNLYGRTFTATYTQKF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactaattcaatattagccaaagcggttcgctttgcgctaattggtggtgctgca
actgcggcattatcagcctctgtcgccacagctgccgatgaccaagctaaagtagaacgt
atcgaagtgacaggttcacgtatcaagcgtaccgatatggaaggttcatctccagtcacc
actatcgatgcatcggctatcgaaaaaaccggtgagctcagcatggcggacgtactgcgt
cgcagcaacctaaacaccttcggttcgacctctgaaaactctggcagtgcccagcagtca
caagcaacaattaacttacgtggcgcaggttctgatcgtactttagtcttattaaacggt
aagcgtatgccaggttcaccgacacttggtggtaccgcggttaacttaaacactatccct
actgctgctatcgagcgcatcgaagtacttaccgatggtgcatctgccgtttatggctct
gatgcggtagcaggtgtggttaacatcatcactaagaaaaactttgatggtgttgaagtg
tctactactgcgaccgacccggtgcaaggtggtggtgaagagtggaagactcacatcgtt
ggcggtttgactggtgataaaggcagcatgaccttctcgttcgagcatttaaaccgtgaa
atcatttaccagcgcgatcgttggttcacgagttcatctaatgttttagcgcctaagttt
gatgatgctactggtgtttcaaaatatgcccgtaatttcttagacggaaaaacgggccaa
tttagccctatggcggcttgtaataaccctaagatggttggcgctggtcatgtgtatgat
gctgggggtggagaccgtgtatgtggctatgactacacttcagaagccgccgatcatgct
tctcgcacctatacagcgggctacgtaaactctgaatatgaattgtcagatgaagtggta
ttccaaggtcaaggcctattctcacgtaatgagacctttggtcgctacgcgccggcagca
ggctggtttaatgtggcagcaaatcaactagacattcaaaactttgatgctgcaggtaac
ttaaccggcgtctctaaaaacccaaatgcgggcaaggcatactaccgtttcaccgatgtc
ggcactcgtgacggaaacacgactgattacagcactgatattcagctagcactcgtcggt
tctcacgatgattttggctgggatgtgacctatcactacaaccttgctgaaaacactaac
tcaggtactggttatgtgcaccgtccaacggttgaacaatatgtaaaggacggtatattc
aactttggaccagagggtaactcacaatcagttattgcagacatagctcacaacacactt
aaacaagatattatgaagttccagagtatcaacgcaggcttaaacttcgaatatttagag
cttccagctggtgctgtatcttggtacttaggcaccgaagcttcacagtataagtatgac
gccaaggttgacgcgcaaactgcagccggtgacgttattggctcctctggcaatggctca
caaggcgatcgcgatgtgtatgcggtatttgctgaatctatcgtgccagtaagcgaagat
gtagaacttaactttgcttaccgttatgacaaatactctgacttcggttctgctactacg
ccaaaggtagccatcagatatcaagctcttgaagatgttgttgttcgtgcctcttgggga
caaggctttcgcgctccatcactgtctgacttgctagcagccgatgctctgagtgctgat
atggcaactgattactcatactgtgatgtgttgggtactgcagttgctgactgtaaagca
aagcagtatgacgttacacgccaagctaactcagagttagagcctgaaacatcagatttt
tataacttaggtgttatttgggatatcacagataacctaagcactaaggttgagtattac
aacctaagtatcgataacgtcatcaccttcgtgtctttagactctttattaaaagaagag
caaaaagtcggttacggcaacttaagccgtggtgaaattaaacgtgttaataataaccct
aacggcaaactattatcggctactacacctaaggccaatggcacaggtttcgatacgaca
ggtatagatttcaacatcacctacagtggatttgaaactgcaattggtgagtttggcacc
agctatgacttaacgtatgtgctgtcatatgacgatgaagaatattttgacggtcctgta
aacgacaagattggtcgtaacggcaagccagaaatacgctttacttgggtgttagactgg
agctatggcgatcactcagcgtcattgttaactcagtatattgacggccaaagtgaaaaa
acgaacccaactgacttctcacaagttggcaatttatcgtcacaaacgaccttcgatgtt
agctatggctaccatacatcttgggatggtaaatttggcttaggtattcgtaacttaact
aatcaagatcctgtgcttgattctgacttagaatatgattcatcactgtataacctttat
ggccgtacatttaccgcgacttacacacagaaattctaa
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