KEGG   Shewanella denitrificans: Sden_2428
Entry
Sden_2428         CDS       T00344                                 
Name
(GenBank) DNA damage-inducible DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
sdn  Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdn03400]
    Sden_2428
Enzymes [BR:sdn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sden_2428
DNA repair and recombination proteins [BR:sdn03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Sden_2428
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 DNApolII_insertion DNA_pol_B_exo2
Other DBs
NCBI-ProteinID: ABE55708
UniProt: Q12LG8
LinkDB
Position
complement(2890399..2892864)
AA seq 821 aa
MSSQALSSVKGRILTRHTLYREGRTVLQYFIKTQQGPALIELDNAEVICFCRQTDLQTLE
QLLAGQLYGQYRLANIKLKSFHHEPLACIYLNTVKQLRLVIRIAQDRGIPLFESDIKTEQ
RFLIERFIALDAEFLGYWLDGNENSSLEQKYAEDISGVPFLKTHRVNELPQLALTRARKA
DVDVTLSMISLDFECAMSGELYSVGLYGDKNGDDNGAPYQKVIMIGEAQADANPWIEWVN
DERALILRLITWFAEYDPDVIIGWAVVTFDLALLYRRCLALGITPAFGRHGQALSWKVAD
KFRPETLSLPGRVVLDGIDWLKAAFYQFERYSLEFVSQALLKEGKAIDHVENRAGEITDL
FQNNKQALAQYNITDCRLVWDIFAKTELLAFALERAKLTGLEFGRVGASIAAFNHLYLPH
LHRHGFVAPSIASSQGIESPGGYVMDSVPGFYKDVLVLDFKSLYPSIIRTFLIDPKGLVT
GMQERPEQTVPGFLGASFSRESPILPTLIASLAAQRELAKLDKNNPLSHAIKIIMNSLYG
VLGSKGCVFHDAKLASSITMRGHEIMKQTRRWIEDLGYQVIYGDTDSTFVWLGENHDINN
INEFGLNIARQITQQWQQKCAEEFNIESFLELEFETHYSQFVMPTLRGSEEGSKKRYVGA
KVNEQGEMSLVFKGMEQVRSDWSPIARRIQYLLYEKLFTGEDPVNFIEQELDALKQGLRN
SELVFRKRLKRNIEDYTAKSSPHVKAAALRCAATGDESFGRKGANVEYVMTKQGARVIQS
AKLDYDYDYYIEKQIQPIAEPILGLLNRSFIEFTSNQLPLL
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgtcatctcaagcactctctagcgtgaaaggccgtattctcactcgccataccttgtat
cgtgaggggcgaactgtgctgcagtattttattaagacgcagcaaggccctgcgcttatt
gaattagataacgccgaagtgatttgtttttgccggcaaacggatctacaaacattagaa
caattgttagcggggcagctctatggccagtatcggttagctaatattaagcttaaaagc
tttcatcatgagccacttgcttgcatttacttaaacacagtcaagcagcttaggctggtt
attcgtatcgcacaggatagaggcataccgctatttgaaagcgatattaaaactgagcag
cgctttttaattgaacgtttcattgcattagacgcagagttcttaggatattggctagat
ggcaatgaaaattcgagcctagagcaaaaatacgcagaagatatttcaggagtgccattc
ttgaagactcatagggtgaatgaactgccacaacttgcattaacgcgagcgcgtaaggcc
gacgttgacgtaacgctatctatgatttcactggattttgaatgtgccatgtcaggggag
ctgtattccgttggtctttatggtgacaaaaatggtgatgacaacggggcaccttaccaa
aaagtgattatgataggtgaggcccaagcggatgctaatccatggatagagtgggtcaat
gatgagcgtgcacttattttgaggctcattacttggtttgctgagtacgatcccgatgtg
atcatcggctgggccgtggtgaccttcgatttagcgctgttatatcggcgctgcttagcg
cttggcattacccccgcctttggtcgtcatggtcaagctttaagttggaaggttgccgat
aaatttaggcccgagaccttgtcgctaccaggaagagtggtgctggatggcatagattgg
ctaaaagcggctttctatcagtttgaacgttattctctagagtttgtctcccaagcgcta
cttaaagaaggtaaagcgatagatcatgtggagaaccgagcaggggagataaccgattta
tttcaaaacaataaacaggcattggcccaatacaatattaccgattgccgcttagtgtgg
gatattttcgccaaaacagagctgttagcgtttgcactagagcgtgctaagttaacaggg
cttgaatttggccgagtcggcgcctccattgccgcctttaatcatctttatttacctcat
cttcatcgtcacggctttgtggcgccaagcattgcatcgagtcaaggtattgaaagcccc
ggcggctatgtgatggattcagtaccaggattttataaagatgtattagtactggatttt
aaaagtctttacccttcgattattcgcacctttttgattgaccctaaggggcttgttact
gggatgcaggaacgcccagagcaaaccgtccccggttttttaggggcaagctttagccga
gagtcacctatactgccgacattaattgcgtccttagcggcgcagcgagagttagcaaaa
cttgataagaataacccgttatcccatgccattaaaatcatcatgaattcactctatggg
gtattaggatcgaagggctgtgtatttcacgacgcaaaacttgcaagctccattaccatg
cgcggccatgaaataatgaagcaaacacggcgctggatagaagacttgggttatcaagtc
atctatggtgacacagattcaacctttgtctggctaggtgaaaaccatgacattaataac
attaacgaatttggactaaatattgccaggcaaatcacccaacaatggcaacaaaagtgc
gctgaggaatttaacattgaaagcttcttagagcttgagtttgaaacccattacagccaa
tttgtgatgccaaccttaagaggatcagaggagggcagtaaaaagcgttacgttggtgct
aaagtgaatgagcaaggtgaaatgagcttagtatttaaaggtatggaacaagtaagaagt
gactggagcccaattgcccgtcgtattcaataccttctttatgaaaaattatttacaggc
gaagacccggtcaattttattgaacaagagctcgatgctttaaaacaagggctgcgaaat
tctgagttagtatttaggaaacgccttaaacgtaacatcgaagattacaccgctaaatcg
tctcctcatgttaaagcggcagcattacgatgtgcggcgacgggtgatgagtcatttggc
cgtaaaggagccaatgtcgaatacgtgatgactaaacaaggtgcacgcgtcatacaaagt
gcaaagcttgattatgattatgactattatatagaaaaacaaattcaacccatcgcagag
cccatcttaggtttattaaaccgcagttttattgaattcacatccaatcaactaccgtta
ctttag

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